Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2968 ATGGGAAGTAAATTTGTAGCGTTGGCTTGCTTCCGTAACAATGAGGGTTCGGGTAACCTTTCGCCTCGTTCTCATTATCCATCGATGCCGAGATATCCAAAAGGTGTGACGAAAGAAGAAGGAAGCAGCAACGTTTTGCTGAAAGCGCTTTTCTCGGTCACCGGAATGACTTGTTCGGCCTGTGCTGCTTCCGTGGAGAAAGCTGTGAAACGTCTTCCTGGAATTCATGAAGCTCTTGTTGATGTTCTGAACAATCGCGCTCAGATCCTCTTCTACCCATCCTTTGTTAATGTAGAAGACTTTAAACCCTAA 312 0.4583 MGSKFVALACFRNNEGSGNLSPRSHYPSMPRYPKGVTKEEGSSNVLLKALFSVTGMTCSACAASVEKAVKRLPGIHEALVDVLNNRAQILFYPSFVNVEDFKP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2968 103 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Pvu2g2968 103 ProSiteProfiles Heavy-metal-associated domain profile. 48 103 IPR006121 GO:0046872
Pvu2g2968 103 PANTHER ATP7, ISOFORM B 6 101 - -
Pvu2g2968 103 CDD HMA 51 102 IPR006121 GO:0046872
Pvu2g2968 103 SUPERFAMILY HMA, heavy metal-associated domain 47 101 IPR036163 GO:0046872
Pvu2g2968 103 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Pvu2g2968 103 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Pvu2g2968 103 Pfam Heavy-metal-associated domain 51 93 IPR006121 GO:0046872
Pvu2g2968 103 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 6 101 - -
Pvu2g2968 103 Gene3D - 47 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2968 Pvu-Chr2 45175821 45176627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2968 1 102 Primary Pumps ATPases AT1G63440 46.226 4.90e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2968 K17686 - pvu:PHAVU_002G288300g 210.305