Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2964 ATGAAGTTATGTACTTCATTGCTGTTGCTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCAGGGTACCTTCAAATGAAGTTTTGGCACTTAAAACATTCAAAGAAGCTGTTTATGAAGATCCACATATGGCTTTGTCCAATTGGAATTCTCTGGATTCAGATCCTTGTGACTGGAACGGTGTTTCTTGCACTGCACTGCGAGATCATGTCATAAAGCTTAATATATCAGGGGCTTCGTTGAGGGGGTTTCTTGCTCAAGAATTTGGGAAAATCACCTACATACAAGAACTGATCTTGCATGGCAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGTTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTATCTGGACCAATTCCACCGGAGATTGGAAATTTGACTCAACTTATGAAAATAAACCTGCAGTCTAATGGGTTGACTGGTTGGATACCTCCGGAGCTAGGAAATTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTTGTGGTAGCAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCAGGTGTGAATTTAACTGGCTTCTGTCGTCCATCTCAGTTAAAAGTAGCAGATTTTTCATATAACTTTTTCGTTGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGATCAAGCTTTCAAGGAAATTGTTTCCATATCGAAGACATAAAGCAGAGGACTTTGGTGCAATGTGGTGCTTCGCCAGCTCGAAGTGGTCCAGTAGTAAACCCGAGGCATGAACCTGCTACCAAACATGTAACCAAGCATCAAGAAGCATCGAAACCTTCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAAAGGTGTAACAACAAATCATCTATCATTATACCTTGGAAAAAATCTGGAAGTGGAAAAGATTATTTGGCATTACAGATAGACTCGGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTCTGGTGTACAAAGGTATAATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAGAATTGGACAGGATACCTTGAGCTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACGCAGGAAAACTGCTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTCTTTGAATATGCATCAAACGGAACACTTTATGAGCACCTACATTGTTATGGAGAAGGGTGCCAGTTATCTTGGACACGGCGTATGAAAATTATCATTGGAATCGCACGTGGACTCAAGTATTTGCACACTGAAATTGAGCCACCATTCACCATCTCAGAATTGAATTCCAATGCTGTTTACATTACAGAAGATTTTTCCCCTAAGCTGGTGGATTTTGAAAGTTGGAAGACCGTTCTTGAAAGATCAGAAAAGAATTCTGGTTCAGTTAGCAGCCAAGGTGCTGTTTGTCTTCTGCCAAACTCCCTTGAAGCACGCCATCTTGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCACCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTTAAAGCAATATGTGAGGTGATAATTCTTTGCATCAGTCCCGATCCCTCTGTCCGTCCATCAATGCGTGAATTATGCATTATGTTGGAGAGCAGAATAGACACATCAATAAATGTGGAGCTAAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCCCTTTCATCATAA 1986 0.4154 MKLCTSLLLLGLVSMLSFVASVRVPSNEVLALKTFKEAVYEDPHMALSNWNSLDSDPCDWNGVSCTALRDHVIKLNISGASLRGFLAQEFGKITYIQELILHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNLTQLMKINLQSNGLTGWIPPELGNLKYLQELRLDRNKLQGSLPCGSSSNFSSNMHGMYASGVNLTGFCRPSQLKVADFSYNFFVGSIPKCLKYLPRSSFQGNCFHIEDIKQRTLVQCGASPARSGPVVNPRHEPATKHVTKHQEASKPSWLLALEIVTGTMVGSLFVIGILTAIQRCNNKSSIIIPWKKSGSGKDYLALQIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSLVYKGIMKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLNHDNAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYITEDFSPKLVDFESWKTVLERSEKNSGSVSSQGAVCLLPNSLEARHLDPKGNIYAFGVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVIILCISPDPSVRPSMRELCIMLESRIDTSINVELKASSLAWAELALSS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2964 661 ProSiteProfiles Protein kinase domain profile. 362 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2964 661 PANTHER PROTEIN MALE DISCOVERER 2 7 661 - -
Pvu2g2964 661 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Pvu2g2964 661 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
Pvu2g2964 661 Gene3D Phosphorylase Kinase; domain 1 338 443 - -
Pvu2g2964 661 Pfam Protein tyrosine and serine/threonine kinase 366 632 IPR001245 GO:0004672|GO:0006468
Pvu2g2964 661 SUPERFAMILY L domain-like 27 235 - -
Pvu2g2964 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 661 - -
Pvu2g2964 661 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Pvu2g2964 661 Gene3D Ribonuclease Inhibitor 142 261 IPR032675 -
Pvu2g2964 661 SUPERFAMILY Protein kinase-like (PK-like) 341 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2964 Pvu-Chr2 45154489 45159287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2964 9 636 Receptor kinase-like Gene Family AT2G01210 27.235 5.09e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu2g2964 PK_Tyr_Ser-Thr 1.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2964 - - gmx:100781978 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1612 2 29851729 29856777 Pvu2g2964 2 45154489 45159287 PCT