Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2954 ATGCCTCAGGGAACCCTAGAAGTTTCTCTTGTTGGTGCCAAAGGCCTTGAGAACACAGATTATCTTGCTAACATGGACCCTTACGTGATCTTCACGTGTCGCACTCAAGAGCAAAAAAGCAGTGTTGCAACAGGTAAAGGAAGTAATCCAAAGTGGAATGAAAATTTTGTGTTCAACATTTCTGAAGGCGTTAACGAACTCAGGTTAAAGATCATGGACAGTGATTCCATGTCTGCCGATGATCTTGTCGGAGAAGTTACCATTTCGCTGGATGCATTGTTCAGGGAAGGGAGTATTCCACCTACTTCATACAATGTTGTGAAGGATAACCACTATTCTGGGGAGATTAGAATTGGCCTCACTTTTAAGCAACGGGATCACAGGGAACGCTGCATAGAGGAAGATTTTGGGGGATGGAAGGAATCTGGCTACAGAGACTAA 441 0.4399 MPQGTLEVSLVGAKGLENTDYLANMDPYVIFTCRTQEQKSSVATGKGSNPKWNENFVFNISEGVNELRLKIMDSDSMSADDLVGEVTISLDALFREGSIPPTSYNVVKDNHYSGEIRIGLTFKQRDHRERCIEEDFGGWKESGYRD* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2954 146 Pfam C2 domain 4 96 IPR000008 -
Pvu2g2954 146 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Pvu2g2954 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 124 IPR035892 -
Pvu2g2954 146 Gene3D C2 domain 2 124 IPR035892 -
Pvu2g2954 146 PANTHER OS02G0640000 PROTEIN 1 142 - -
Pvu2g2954 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pvu2g2954 146 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2954 Pvu-Chr2 45070929 45072446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2954 4 127 C2H2 Transcription Factor Family AT4G21160 29.032 2.59e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2954 - - gmx:100782974 244.202