Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2942 ATGGAGAAACATCAACTATTCAACCCTATCTCATCTTCATCTTCATCTTCATCATCTCCTTCTACTTCTTATTTTAATAACTCTCATGTTCATCATGTCAAAAAGGGTGCAGGTTTCTTAAGAACTCCAGAGCCAAGCCAGAAAGTTGGCAAAGAAATGAAGCAGCACAGATTTGCATTTCAAACAAGGACTCAAGTTGATATACTTGATGATGGATATAGGTGGAGAAAGTATGGGGAAAAGTCCGTGAAGAACAACAAGTTCCCTAGAAGCTACTACAGATGTTCTTATCGAGGGTGCAATGTGAAGAAACAAATCCAACGGCATAGCAAAGACGAAGAGATTGTGGTAACAACCTATGAAGGGACTCATTCTCATCCTGTGGAGAAGCCAATTGAGAGTTTCGAGCAGATATTGAAAAATCATCACATATATAACCTCACTCTATAA 450 0.3867 MEKHQLFNPISSSSSSSSSPSTSYFNNSHVHHVKKGAGFLRTPEPSQKVGKEMKQHRFAFQTRTQVDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSKDEEIVVTTYEGTHSHPVEKPIESFEQILKNHHIYNLTL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2942 149 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2942 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 144 IPR044810 GO:0003700
Pvu2g2942 149 SUPERFAMILY WRKY DNA-binding domain 61 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2942 149 Gene3D WRKY domain 56 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2942 149 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2942 149 MobiDBLite consensus disorder prediction 1 27 - -
Pvu2g2942 149 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 144 - -
Pvu2g2942 149 Pfam WRKY DNA -binding domain 70 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2942 Pvu-Chr2 44960603 44961321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2942 57 146 WRKY Transcription Factor Family AT5G13080 74.444 1.60e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2942 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2942 - - gmx:100127378 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2942 2 44960603 44961321 Pvu2g2942 2 44960603 44961321 ECH