Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2939 ATGTCGGAATCTCGCCCCCCTAAGCGCCCCAAAATAACTAGGGGGGACGATGATTATATGCCGGGAAATATTCTTGAGATTGAGCTTTGTAATTTCATGACGTTTGACTACTTAAAATGCAAACCTGGGCCTCGACTGAATCTTGTAATTGGACCCAATGGTTCTGGTAAGAGTTCGCTTGTATGTGCTATCGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGTGCTACAAGTATTGGGGCATATGTGAAGCGTGGAGAAGAATCTGGCTACATTAAGATCACCTTGAGAGGGGACCACAAAGAGGAACACATTACCATTATGCGGAAAATTAGTACTAATAACAAGTCTGAATGGTTGTTCAATGGAAATGTGGTGTCTAAAAAGGATGTGGCTGAAACCATTCAAAGGTTTAACATACAAGTCAATAATTTGACCCAGTTTCTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTTCAACTTCTGGAAGAGACTGAAAAGGCTGTTGGCGATCCACAGCTTCCAGAGCAACATCGAACACTAATTGATAAAAGCCGTTCATTGAAACATATTGAGTTGTCTCTGGAGAAAAATGAAGGAACCTTAAAACAGTTGAAGGAACGAAATGCTGAATTAGAGACGGATGTTGAGCGTGTTCGTCAAAGAGAGGAACTTCTTGCCAAGGCTGAAGCAATGAAAAAGAAGTTGCCATGGCTGAGATATGATATGAAGCAGGCAGAATACCGGGAAGCTAAGGAGCGTGAGAATGATGCAGCAAAGGCATTTGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCTGTTATGAAACATAAAGAAGAGAAGGCTGCAATAGATGCAAAATGCAAAAAGGTTAATCGCAATATAAATGAGAATTCAAAGAAGAGAAACGAGCTTATGGAGGAGGAGAACAAATTGGATGTGGAATTACAAGGAAAATACAAAGAAATGGAAGAGTTGAGGAGACAAGAAGAGACACGACAACAAAAACTTGTAAAAGCAAGGGAGGAACTTGCTACTGCTGAACATGAACTTGAGAACCTACCCTCTTATGTACCTCCCAAGGATGAGCTTCAAAGACTAAGAGCTGAAATTGGGGAATTGGATTATTCTGCTAATCAAGTGAGGCAGAATAAGTCGCAAGCAGAGAATGAAATAAAGCGTAAGAAGTCATTTATGATGCAGAATAAAGAGAGGTTGATGGAAATGAATAATAAAAGTACGAAGTGTTTGCATGTATTACAAAGGTCAGGGGCTGAAAAAATTATTGAAGCTTATAAATGGGTCCAAGAACATCGGCAGGAATTCAATAAGGAGGTTTACGGCCCAGTTTTAGTAGAGGTGAATGTATCAAATAAGGTTCATGCTGCATATCTAGAGGGTCAAGTGGCTCACTACACTTGGAAGTCCTTCATAACACAAGATTCTGGTGATCGAGATCTTTTGGTGAAACACCTGCAGTTCTTTGATGTGCCAGTTTTAAATTATACTGGTGGTGATGATGGCCACCAAAGAGAGCCTTTTGAAAATTCTGAAGATAAGCGTGCTCTTGGCATATACTCCCGGCTGGATCAAATTTTTGATGCTCCTATTGCTGTGAAGGAGGTTTTGATTAGCCAGTTTAATCTAGATTATTCATATATTGGATCCAACGAAACTGATCAGAATGCTGATGAGGTCCCAAAATTGGGAATTTCAGATTTGTGGACACCTGAAAATCACTACCGTTGGTCCAAGTCTAGATATGGAAATCATGTCTCTACAGTCGTTCAACAAGTGGAACGCCCACAACTTTTAGTGAATAATTTGAATGTTGGGGAAATTGAGAAGCTGCGTTCTCAGCAAAAGGAGCTTGAAGAAGTCGTTGCTAATTTGGAGGAATGTGTTAAAAAGTTTCAAGATGAAGAAAGAAGCTTAGTGAATCAAGCTGCCAATCTTCGCAAGCAGTGGGAAGGCATTAGTATTACAGTACAGAATGAACACAGAAATCGTCAAACACTCATTAGCCGTATTGATCAGAGGAAAGGGTATTTAAAAGTGATGGAGGAACGGGATGATTTAGATACTGAGATAGCAAAGCTTGTTCATCAGGCTTCCAAGTATAATATTCAGCGTTTCCATAATGCAATGGAAATTAAGGATCTTCTTGTCGAAGCTGTGAGTTACAGAAGAATTTTTATTGAGCAACGTATGGCTTTTATTGAATTTGATGCAAAGATTGGAGAAATGGACGCCAACCTGAAGCAGCATGACAATTTGGCTGTGCAAGCATCATTGCACTTTGAAAACTGTAAGAAAGAATCTGAGAATTGTAGACAGAAGCTTACAGATTCCTTGAAGTATGCTAAATCAATTGCTCAGCTTACACCTGAGCTAAAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAACTGGAGGCAGCTATCCAGGATACCACTTCTCAAGCCAATTCAATTCTCTTTGTCAATCATAACATATTGGAACAATATAAAGATCGTCAACGGCAGATAGAAGATCTTGCAGCAAAACTGGAAGCAGACAAAAAGGAATCTACACGGTGTTTGGCTGAATTAAATAACATTAAGGGAAAATGGCTTCCTACATTGAGAAACCTTGTGGTAAAAATAAATGAAACTTTCAGTTATAATTTCCAAGAGATGGCAGTTGCTGGAGAAGTGTCCCTAGATGAGCATGATATAGATTTTGATCAATTTGGAATACTGATAAAAGTTAAATTCAGAGAAAATGGACAACTTAATGTTTTGAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTGACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAATTAGTGCGAGCAGCAAGCAAGCCAAATACACCCCAGTGTTTCTTACTTACCCCAAAATTGTTACCAGATCTGCAATATAGTGAAGCATGCAGTATATTGAATGTGATGAATGGCCCTTGGATTGAGCAACCCTCGAAGGTCTGGACTACTGGTGATCGATGGAGTATTATCACAGGGCTTGTTGGAAACACCCCTTGCTAA 3162 0.3997 MSESRPPKRPKITRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEEHITIMRKISTNNKSEWLFNGNVVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRTLIDKSRSLKHIELSLEKNEGTLKQLKERNAELETDVERVRQREELLAKAEAMKKKLPWLRYDMKQAEYREAKERENDAAKAFEEAAKLLNDLKEPVMKHKEEKAAIDAKCKKVNRNINENSKKRNELMEEENKLDVELQGKYKEMEELRRQEETRQQKLVKAREELATAEHELENLPSYVPPKDELQRLRAEIGELDYSANQVRQNKSQAENEIKRKKSFMMQNKERLMEMNNKSTKCLHVLQRSGAEKIIEAYKWVQEHRQEFNKEVYGPVLVEVNVSNKVHAAYLEGQVAHYTWKSFITQDSGDRDLLVKHLQFFDVPVLNYTGGDDGHQREPFENSEDKRALGIYSRLDQIFDAPIAVKEVLISQFNLDYSYIGSNETDQNADEVPKLGISDLWTPENHYRWSKSRYGNHVSTVVQQVERPQLLVNNLNVGEIEKLRSQQKELEEVVANLEECVKKFQDEERSLVNQAANLRKQWEGISITVQNEHRNRQTLISRIDQRKGYLKVMEERDDLDTEIAKLVHQASKYNIQRFHNAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIGEMDANLKQHDNLAVQASLHFENCKKESENCRQKLTDSLKYAKSIAQLTPELKKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNILEQYKDRQRQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVVKINETFSYNFQEMAVAGEVSLDEHDIDFDQFGILIKVKFRENGQLNVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDRWSIITGLVGNTPC* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2939 1053 CDD ABC_SMC5_euk 926 1028 - -
Pvu2g2939 1053 Coils Coil 622 663 - -
Pvu2g2939 1053 Pfam RecF/RecN/SMC N terminal domain 25 994 IPR003395 -
Pvu2g2939 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 779 1004 IPR027417 -
Pvu2g2939 1053 Gene3D - 23 232 IPR027417 -
Pvu2g2939 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1048 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pvu2g2939 1053 Coils Coil 842 876 - -
Pvu2g2939 1053 Coils Coil 194 235 - -
Pvu2g2939 1053 Gene3D - 842 1022 IPR027417 -
Pvu2g2939 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 283 IPR027417 -
Pvu2g2939 1053 Coils Coil 257 277 - -
Pvu2g2939 1053 CDD ABC_SMC5_euk 22 179 - -
Pvu2g2939 1053 Coils Coil 296 358 - -
Pvu2g2939 1053 Coils Coil 372 392 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2939 1 1042 Structural Maintenance of Chromosomes family AT5G15920 62.092 0.0 1291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2939 K22803 - gmx:100778678 1856.65