Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2930 ATGGAGTTTGTGAAGAAGTGTAAGAGGGTGTTGGAAAGTGGGAAGAGATTGCATGCGGAGAACAGTTCAAGTGGAAGGTATGGAAGGTTGAAAAAGAAAGAACGGCAACAGAGGAAGAAGCCTTGTGTGGCTCCACATGGTTGTCTCTGCGTGTACGTTGGAGCAGAGAGAGAGAGATTCATTGTAAAGATAAAGATAGCGAATCACCCTTTGTTCAAAGAGCTTTTGGACGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCCTTGTGGCTCCCTTGTCACGTTGACTTCTTCTGTGAGGCACTGACGGAGATGGAGATCAGCACCACCGAAGAAGATGTAATGGGTGGGTGTTCTGTAGGTTGCGTGGGCCATAGTTACAGCCACAACTCGTCTTCTTCAGTTTGTGATCTCAGTTGTAGATATGCGACAGGGTCTTCCTCTTATCGTTATTATGAAACCCATGTGAATTGA 480 0.4604 MEFVKKCKRVLESGKRLHAENSSSGRYGRLKKKERQQRKKPCVAPHGCLCVYVGAERERFIVKIKIANHPLFKELLDGAEREYGYRNDGPLWLPCHVDFFCEALTEMEISTTEEDVMGGCSVGCVGHSYSHNSSSSVCDLSCRYATGSSSYRYYETHVN* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2930 159 PANTHER SMALL AUXIN-UP RNA-RELATED 1 131 - -
Pvu2g2930 159 MobiDBLite consensus disorder prediction 19 38 - -
Pvu2g2930 159 Pfam Auxin responsive protein 6 104 IPR003676 GO:0009733
Pvu2g2930 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2930 Pvu-Chr2 44830051 44830726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2930 36 100 Calmodulin-binding Proteins AT3G43120 46.154 6.42e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2930 K14488 - gmx:102667331 161.384