Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2918 ATGGAAAAGCTGAATTTTGTTAAAAATGGAGTGAGCAAATTGCCTCCTGGTTTTCGTTTTCAGCCAACAGATGAAGAACTTGTTTTCCAATACCTCAAGTGTAAGGTCTTCTCATATCCCTTGCCTGCTTCTATCATCCCTGAGATCAATGTCTGCAAGCATGATCCTTGGGATTTACCAGGGAATTGTGATCCGCAAGAGAGGTATTTTTTCAGTCCAAAGGAAGCAAAGTATAGAAATGGTAATCGCATGAACAGAACAACAAAGTGTGGATATTGGAAGGCAACAGGGTCAGACAAGAGAATTTCATCATCTTCAAATGCTTGTAATGGCATTGTGGGGATAAGAAAAACATTGATTTTTTATGAAGGAAAATCTCCTAAAGGCTCCAGAACTGACTGGGTCTTGCATGAATATCGTCTTGTTAATGCAGAAACTGGTGCTTGCAACTCATCCCATAACTACGTAAACGAGATTGGAGATTGGGTTTTGTGTCGCTTATCGATGAAGAAAAGAAGTATAGAAAGTGGTGTTGATGAGAAGCAAAGAGTTCATAATGGACCAAGATTAATGTTTGATTTTATGATGTTAGGAAAAACCGATTCTTCTACATCTTCATCGTGTTCAAGTTCTAATAACATTATGGAAGTCTCTTCAAATGCATCGGATCATGAAGAAACAAGTGGTGGCTATGCCTACTTTTAG 705 0.3844 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKHDPWDLPGNCDPQERYFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSSNACNGIVGIRKTLIFYEGKSPKGSRTDWVLHEYRLVNAETGACNSSHNYVNEIGDWVLCRLSMKKRSIESGVDEKQRVHNGPRLMFDFMMLGKTDSSTSSSCSSSNNIMEVSSNASDHEETSGGYAYF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2918 234 MobiDBLite consensus disorder prediction 203 234 - -
Pvu2g2918 234 MobiDBLite consensus disorder prediction 203 226 - -
Pvu2g2918 234 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Pvu2g2918 234 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Pvu2g2918 234 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Pvu2g2918 234 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 233 - -
Pvu2g2918 234 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 233 - -
Pvu2g2918 234 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2918 Pvu-Chr2 44711971 44713213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2918 1 173 NAC Transcription Factor Family AT5G13180 61.272 6.17e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g2918 NAM 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2918 - - gmx:100812015 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2918 2 44711971 44713213 Pvu9g1581 9 22214660 22216369 PCT