Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2909 ATGAAGAACTTGCCCACATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAATTGAGCTTTTGCTTGGAGATTTTCTGTCTCTCTAATCATGCAGATAGAATTGTTCGGCTTCCCGGGCAACCCAACACAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACCTCAAACACAAAGCTCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATTAAAAACGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGGGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATTCAGGAACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATACGCCACTGACTTGAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCTGATTCAACGTACAAATTGTTTACTACAGGTTGTAATTATTCCCGGTATGTCAGTGAATACTATAGAGACTCGATTTCGCCGGTTTGTTCAAAGGTTTTGAGGCATGTAGCCAGAGAAACCAGTAGGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAAAAATAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGGAAAGATGTACAAGAGGCGCTCCATGCCAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAACATTTTGGACTATGATATGCTCAACCTGGAGAAACCTACACTTCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGCCGCACCTTAGTTCAAAAGCTGGCTAGACAACTAGGATTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCGTTTGTTTTGTTCAAGTCATTCTTGGAAGATAGGCCTCTACCTGAAATTTTCTGA 1401 0.4276 MKNLPTWKTMAMTVVLLQLSFCLEIFCLSNHADRIVRLPGQPNTGFQQFSGYVTVDDLKHKALFYYFVESETHPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQFRNRDLFLAGESYAGHYVPQLAKLMIEINKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPVCSKVLRHVARETSRFVDKYDVTLDVCISSVLSQSKAICPQGQKINESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYDMLNLEKPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFLEDRPLPEIF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2909 466 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Pvu2g2909 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 464 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 Gene3D - 360 458 - -
Pvu2g2909 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Pvu2g2909 466 PANTHER CARBOXYPEPTIDASE 27 464 - -
Pvu2g2909 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Pvu2g2909 466 Gene3D - 314 350 - -
Pvu2g2909 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Pvu2g2909 466 SUPERFAMILY alpha/beta-Hydrolases 37 463 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2909 Pvu-Chr2 44640941 44644076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2909 322 462 Calmodulin-binding Proteins AT2G22960 28.369 1.38e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2909 K16297 - gmx:100800002 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2909 2 44640941 44644076 Pvu2g2909 2 44640941 44644076 ECH