Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2908 ATGGCAAAACAGCGAAACCAGGGCAAAAGCCAAGAGAGGGAATTGGAACTCGAAAATCAAGAATCTGAGGCTGAGATTGAGGCCCCATTGCCTCTCACTGTGACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAAGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACTGCAAAACATCGTTCAACTGGCTTCCCTCATCGTACTTCCATCACCATGACGTCTAGTTCTTGCGTTATAGAACGGTTGGAGGATCCAAAATTGGTGCTGCACCTTGATCAGACAGAAATTAGATTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAGTCAAGCTCTTTTTCTTGGGACATGCTCTCTTCACTACACCACACTGAACACAGTAGTAGCAATGAACAATCTGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATTTCCCTGGGAATGCCGATACTTGTCCAAAAGAAGCAGCAGCAGTTATAAAGGTATCACCATCAAGAATGGCAACACAGTCTGAACGTCTTGGCTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCAGTTTTGAATGGCAACAAATAAAGGAAGCTGCAGAAAAAGCTAGAGAAGCAGCAAGTTCTGAGGGTGATGAAATTGGTGAGATGACATGCTTTGAACTTTTGGAAGCACTTGAGCTCAGCCGGTGTCTCTTTTTTATGAGTTATGTACACGGTTCACCCTTGCTTGAAAGCTCTACTGCATTCAAGTCAAAGGGATGTGCAGAGAGAACGTCTGAAGCTCTTGGCAGGGTGCTGATGCTGGACCTTGTCATCAGAAATGAAGATAGGCTACCTTGCCGTGACCTTAGATGGCGTGGGAATCCAGCAAATTTGTTGTTGGCTGGAAAGATTATCTGTGCAAATACAGATGTGCTAAAAGCCGCTGTAGATTCTGCAATTGACCGATATAAACCAAAGATGACATGGGCTCTTCAGAAAGAAAGAAGGTCAACTTCAGTAGAATGCAGACTCGATTCTCACGATCCTGGCTTGATATCACAATCCTCTGATCTTTCAGATATAACAGAATTTCCAATATCTCTTGACATGAACCTTATAGGTCAAACATCTGAAGAATCAATGTCTACGGACATTAGCATAGTAGCCATTGATTCTTGTGTTCCTCGGCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGATTGAGTTGTTAATCAATAGTTCTGAATTTGCCTCAAACCTGATATATGATGTGACTGGAGGGAAATTAGGATGTCCTCCACAAGAAGACATGGATAAAACTGATAATGACGTAATGTCTGTAGTTCATGCGTTCCGTACTGGTTTCCGCGCTGCTCTCAGGGATCTGCAGGGATTTCACATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTACGACAATTTATGAACATTTCAAGTAAAATATCTTTGGGAGAATTTGACAAAGAAGATACTGTGGTTCCTGACTCACCTTCACTGGCATCTGGGGGGCATTGTTCCTCTCCATCATGCAAGGGGAGGCTTGGTAATGATAACCATCATGATTTGATTGATTCAGAATCACTGAGAACTCCTTCAAAGGCATCATCTTCAGGCAACAGAGATTCCAGTCCTACGTCAAGAGAAACTTGCCATGGAAAGTTCTATAAAAATGGGGAACCACTTCGTAGTCTGCGTTTGACTACTATGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATGCAGTAAAGAATTGGAACAATGGAATGAAATGCTTAAAAGTGACGCCATCAAACTATGTCAGGAGAACAATTTCAATCCAGGATTTTTTGAGGGTGATAATAACTGTGTTATTGACGCATATGAACTTAAGATTAGACTTGAGCATATTCTCGAGAGAATTGGATTGATATCAGATGCTGCAAGTACTGAGAAACCTTCAGCCGTGACGAGTAGTCTATTTATTGGTGGAGCATTGGCTGCAAGATCTGTTCATACACTGCAATACTTGGGAATCACAAATATTTTATGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCATGATCTATTTGTGTATAAGAATTTCTCTGTATGTGACAGTGATGATTACAACATCAGCAGCATATTTGAAGAAGCATGTGATTTTATAGATTATGTTGAACAAACTGGTCAAAGAGTTTTAGTTCACTGCTTTGAGGGGAAAAGCAGAAGTGTCACATTGGTCCTCGCATACTTAATGCTCAGGAAGGAGTATACTTTATCAGAAGCATGGCAAGCTTTGAAGCGAGTTCACTGTCGAGCACAACCCAACGACGGTTTTGCAAAGATCTTATTGGAATTGGATCAGAAACTATATGGAAAGGTTTCGATGGAATGGCTTCAGCGAAAACCAATGATGAAAGTTTGCCCAATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAGCTCCATCTGCAGAAATCACATAGAAAACTGTCCTCTGGGAGTGTAGATAGCGCCATGACTATGGAAATTCAGAAAGCTTTGACAGCTTTGAAGATTAGCCGTGGAGGGAGTGTCAGCCCCACACAAAGATAA 2721 0.4215 MAKQRNQGKSQERELELENQESEAEIEAPLPLTVTSRVLYMLGDITAGPAFKFTQWLQLVRKRTAKHRSTGFPHRTSITMTSSSCVIERLEDPKLVLHLDQTEIRLWERLGKAAMLDIESSSFSWDMLSSLHHTEHSSSNEQSEDEMNKALEVTVNSGGVVFFAFFNFPGNADTCPKEAAAVIKVSPSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSFEWQQIKEAAEKAREAASSEGDEIGEMTCFELLEALELSRCLFFMSYVHGSPLLESSTAFKSKGCAERTSEALGRVLMLDLVIRNEDRLPCRDLRWRGNPANLLLAGKIICANTDVLKAAVDSAIDRYKPKMTWALQKERRSTSVECRLDSHDPGLISQSSDLSDITEFPISLDMNLIGQTSEESMSTDISIVAIDSCVPRRPPAGKRANDQVNYPKLIELLINSSEFASNLIYDVTGGKLGCPPQEDMDKTDNDVMSVVHAFRTGFRAALRDLQGFHIFLLTLHQRLDTLLRQFMNISSKISLGEFDKEDTVVPDSPSLASGGHCSSPSCKGRLGNDNHHDLIDSESLRTPSKASSSGNRDSSPTSRETCHGKFYKNGEPLRSLRLTTMLRDFHKFAKVDAECSKELEQWNEMLKSDAIKLCQENNFNPGFFEGDNNCVIDAYELKIRLEHILERIGLISDAASTEKPSAVTSSLFIGGALAARSVHTLQYLGITNILCLCTNEIGQSETQYHDLFVYKNFSVCDSDDYNISSIFEEACDFIDYVEQTGQRVLVHCFEGKSRSVTLVLAYLMLRKEYTLSEAWQALKRVHCRAQPNDGFAKILLELDQKLYGKVSMEWLQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQR* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2908 906 SMART dsp_5 687 829 IPR020422 GO:0006470|GO:0008138
Pvu2g2908 906 Gene3D - 271 388 IPR036940 GO:0016301
Pvu2g2908 906 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 906 - -
Pvu2g2908 906 SUPERFAMILY Protein kinase-like (PK-like) 55 431 IPR011009 -
Pvu2g2908 906 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 756 808 IPR000387 GO:0016311|GO:0016791
Pvu2g2908 906 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 906 IPR035010 GO:0004721|GO:0009737|GO:0043622
Pvu2g2908 906 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 687 832 IPR029021 -
Pvu2g2908 906 MobiDBLite consensus disorder prediction 529 592 - -
Pvu2g2908 906 Pfam Dual specificity phosphatase, catalytic domain 706 828 IPR000340 GO:0008138|GO:0016311
Pvu2g2908 906 MobiDBLite consensus disorder prediction 1 24 - -
Pvu2g2908 906 Coils Coil 1 25 - -
Pvu2g2908 906 Gene3D Protein tyrosine phosphatase superfamily 670 839 IPR029021 -
Pvu2g2908 906 Pfam Actin-fragmin kinase, catalytic 103 390 IPR015275 -
Pvu2g2908 906 CDD DSP 688 825 - -
Pvu2g2908 906 MobiDBLite consensus disorder prediction 1 17 - -
Pvu2g2908 906 MobiDBLite consensus disorder prediction 568 590 - -
Pvu2g2908 906 ProSiteProfiles Dual specificity protein phosphatase domain profile. 687 832 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2908 Pvu-Chr2 44633033 44639331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2908 6 898 Protein tyrosine phosphatase (PTP) family AT5G23720 62.404 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2908 K14165 - gmx:100791993 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2908 2 44633033 44639331 Pvu2g2908 2 44633033 44639331 ECH