Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2904 AGAGGAGTAAAGATTCAGATGTGTTGTGAGAGGAAACCTGGTCTCTTGCTGTCCACCATGAGGGCTCTCGACAACCTTGGCATAGACATTCACCAAGCAGTCATCACCTACTGCAATGGCTTTGCCATGGATATTTTCCGAGCTCAGCTACGCAACGAAGGTCAAGATGTGCATCCAGAGCAAATCAAAGCAATTCTATTAGATTCAGCTGGCTTCCATAGCATGAACTAA 231 0.4589 RGVKIQMCCERKPGLLLSTMRALDNLGIDIHQAVITYCNGFAMDIFRAQLRNEGQDVHPEQIKAILLDSAGFHSMN* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2904 76 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 75 - -
Pvu2g2904 76 CDD ACT_UUR-ACR-like 5 65 - -
Pvu2g2904 76 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 75 - -
Pvu2g2904 76 SUPERFAMILY ACT-like 3 74 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2904 Pvu-Chr2 44609349 44610018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2904 1 50 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 64.000 2.57e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2904 - - pvu:PHAVU_002G2823001 157.918