Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2903 ATGGCGTCGTCGGAGGTATCAATCAAGGGAAATTTGGTGAACGGAAAAGGAGAAAACAGTTCCGGTGGCTTCAACAACGGCAACGATGTTAGGAACGCTGGAGGAGAGCCTCAGAATGGTTCTTCTTCGTCATCCGCCAGAGACGCGGAGACAGCGCTTTACCGGGAGCTTTGGCACGCGTGCGCGGGTCCGCTGGTGACGGTACCTAGAGAAGGAGAGCGCGTGTTCTACTTTCCTCAAGGACATATAGAGCAGGTGGAAGCGTCGACAAATCAGGTAGCGGAACAGCATATGCCGGTTTACGATCTACCACCGAAGATCCTTTGTCGGGTCATCAACGTCATGCTCAAGGCGGAGCCAGACACAGACGAGGTGTTTGCTCAAGTGACCTTGCTTCCTGAGCCAAATCAAGACGAAAATGCGGTGGAGAAGGAGGGTCCTCCGGCACCGCCTCCTCGGTTTCACGTGCATTCGTTTTGTAAAACGCTGACGGCTTCTGATACGAGTACTCACGGTGGATTTTCGGTGTTGAGACGACATGCTGATGAATGCCTCCCTCCGCTGGACATGTCAAAGCAGCCACCTACCCAGGAGTTGGTGGCCAAGGATCTACACGGGAACGAGTGGCGATTCAGGCATATTTTTCGGGGTCAACCGCGTAGACACTTGCTGCAAAGCGGATGGAGTGTTTTTGTGAGCTCCAAGAGGCTGGTTGCTGGGGATGCGTTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGAGTTGGTGTTAGGCGTGCAATGAGGCAGCAGGGTAACGTTCCGTCCTCGGTTATCTCGAGCCACAGTATGCATCTTGGTGTTCTCGCAACTGCTTGGCATGCCATATTGACTGGAACCATGTTCACCGTGTATTACAAACCTAGGACTAGTCCAGCTGAATTTATAGTTCCGTATGATCAGTACATGGAGTCTCTAAAAAACAATTACACCATCGGGATGCGGTTCAAAATGAGATTTGAAGGTGAAGAGGCTCCCGAGCAAAGGTTTACCGGTACCATTGTTGGAATTGAAGATGCTGATCCCAAAAGGTGGCCTAACTCCAAATGGAGAAGTCTTAAGGTGAGATGGGATGAAACTTCTAACGTACCTCGTCCTGAGAGAGTTTCCCAATGGAAAATAGAGCCGGCCCTCGCTCCTCCTGCTCTTAACCCTTTACCTATGCCCAGGCCTAAGAGGCCTCGATCTAATGTGGTTCCATCATCCCCAGATTCCTCTGTTCTTACCCGTGAAGCATCGTCTAAAGTGAGTGTAGACCCTTTGCCAGCTAGTGGGTTTCAAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGTAAATTTTGCCGAAAGCAATGAATCTGATACGGCAGAGAAGTCTGCGTGGTCATCTGCTGCAGATGACGAAAAGATTGATGTTGTTTCCACCTCAAGAAGGTATGGATCAGAGAGCTGGATGTCAATGGGAAGGCATGAACCAACATATCCAGATCTACTTTCTGGCTTTGGGGTCCATGGAGATCAATCTTCCCATCCATCATTTGTTGATCAAAATGGTCCTGTAGCTAACCTTAGTAGAAAACATTTTTTGGACCGCGAAGGCAAACATAATGTTCTTAGTCCATGGCCCAGTCTACCACTCAATCTCTTGGACTCTAATACAAAAGCCTCTGCTCAAGGTGGTGATACAACTTGTCAAGTTCGAGGGAATATGAGGTTTAGCAGTGCATTTGGTGACTATACTGTGCTTCATGGGCACAAAGTTGAGCATTCACATGGAAACTTTTTGATGCCTCCTCCACTGTCAACTCAATATGAGAGTCCTCGTTCTAGAGAACTGTTACCCAAACCAATATCAGGAAAACCGAAGGACAGTGACTGCAAGCTATTTGGCATCTCACTTCTTAGTAGCCCCATTGTTCTGGACCCTTCTGTATCACAAAGGAATGTTGCAATTGAGCCAGTTGGTCACATGCATAACCAACAGCATACATTTGAAAATGACACGAAGTCTGAGAATTCAAGGGGATTGAAACCGGCTGATGGTCTGCTGATTGACGACCATGAAAAGCTGTCGCAAAATTCTCAGCCACATCTGAAAGATGTTCAACCCAAATCTAATAGTGGTTCTGCTAGAAGTTGCACTAAAGTTCACAAGAAAGGGATTGCACTTGGTAGGTCGGTAGACCTCACAAAATTCAGTGCGTATGATGAGTTAATCGCTGAATTAGATCAGCTATTTGAATTTGGAGGTGAATTAACCTCTCCCCAAAAAGATTGGCTTATTGTCTACACTGACAATGAGGGCGATATGATGCTTGTTGGTGATGATCCGTGGCAGGAATTTGTTGCTATGGTACGCAAAATTTATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCGGGTACCTTGAGTTCAAAGAATGAAGAGAATCAATCGGTTAGTGAAGGTGTAGAGGCACAAGAAATAAAATGTCAGCTGAATCATTCAGCTTCAGAGGCCTGA 2529 0.4705 MASSEVSIKGNLVNGKGENSSGGFNNGNDVRNAGGEPQNGSSSSSARDAETALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPNSKWRSLKVRWDETSNVPRPERVSQWKIEPALAPPALNPLPMPRPKRPRSNVVPSSPDSSVLTREASSKVSVDPLPASGFQRVLQGQELSTLRVNFAESNESDTAEKSAWSSAADDEKIDVVSTSRRYGSESWMSMGRHEPTYPDLLSGFGVHGDQSSHPSFVDQNGPVANLSRKHFLDREGKHNVLSPWPSLPLNLLDSNTKASAQGGDTTCQVRGNMRFSSAFGDYTVLHGHKVEHSHGNFLMPPPLSTQYESPRSRELLPKPISGKPKDSDCKLFGISLLSSPIVLDPSVSQRNVAIEPVGHMHNQQHTFENDTKSENSRGLKPADGLLIDDHEKLSQNSQPHLKDVQPKSNSGSARSCTKVHKKGIALGRSVDLTKFSAYDELIAELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSVSEGVEAQEIKCQLNHSASEA* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2903 842 PANTHER AUXIN RESPONSE FACTOR 2 37 826 - -
Pvu2g2903 842 SMART B3_2 159 261 IPR003340 GO:0003677
Pvu2g2903 842 MobiDBLite consensus disorder prediction 807 842 - -
Pvu2g2903 842 SUPERFAMILY CAD & PB1 domains 720 796 - -
Pvu2g2903 842 MobiDBLite consensus disorder prediction 1 48 - -
Pvu2g2903 842 MobiDBLite consensus disorder prediction 392 432 - -
Pvu2g2903 842 MobiDBLite consensus disorder prediction 411 426 - -
Pvu2g2903 842 MobiDBLite consensus disorder prediction 393 409 - -
Pvu2g2903 842 SUPERFAMILY DNA-binding pseudobarrel domain 155 288 IPR015300 -
Pvu2g2903 842 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
Pvu2g2903 842 Gene3D - 715 808 - -
Pvu2g2903 842 ProSiteProfiles PB1 domain profile. 719 801 IPR000270 GO:0005515
Pvu2g2903 842 Pfam AUX/IAA family 765 807 IPR033389 -
Pvu2g2903 842 MobiDBLite consensus disorder prediction 703 721 - -
Pvu2g2903 842 Gene3D - 156 261 IPR015300 -
Pvu2g2903 842 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 826 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pvu2g2903 842 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Pvu2g2903 842 CDD B3_DNA 157 259 IPR003340 GO:0003677
Pvu2g2903 842 MobiDBLite consensus disorder prediction 701 721 - -
Pvu2g2903 842 Gene3D - 322 392 - -
Pvu2g2903 842 Pfam Auxin response factor 285 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2903 Pvu-Chr2 44603605 44608648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2903 1 842 B3 DNA Binding Superfamily AT5G62000 64.719 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pvu2g2903 AUX_IAA 1.7e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2903 - - gmx:100815956 1459.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2903 2 44603605 44608648 Pvu9g1672 9 23557877 23563227 PCT