Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2865 ATGGAGCGGAAAACTCTTGGGTTTATCTTCCTTCTCTTCTTAGTCTTGGCCGCTGATGTGGCGGTGAAGAGAGCAGAGGCGAGACTATGTTGGTCGGAAAGCCAAGCGTTCAAAGGTTTATGCTTCAGCAACGACAACTGTGCAACCGTGTGTCTCACCGAAGGTTTCACCGGTGGCAAATGTGAAGGCCTCCGTCGCCGCTGCTTCTGCAGCAAAAACTGTTGA 225 0.5156 MERKTLGFIFLLFLVLAADVAVKRAEARLCWSESQAFKGLCFSNDNCATVCLTEGFTGGKCEGLRRRCFCSKNC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2865 74 PANTHER DEFENSIN MTDEF4.7 1 74 - -
Pvu2g2865 74 Gene3D - 27 74 IPR036574 -
Pvu2g2865 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Pvu2g2865 74 CDD Knot1 39 70 IPR003614 GO:0006952
Pvu2g2865 74 SMART gth_4 29 74 IPR003614 GO:0006952
Pvu2g2865 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Pvu2g2865 74 Pfam Gamma-thionin family 28 74 - -
Pvu2g2865 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Pvu2g2865 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Pvu2g2865 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2865 Pvu-Chr2 44284227 44284753 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2865 9 74 Plant Defensins Gene Families AT2G02120 51.515 1.45e-20 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2865 - - gmx:102666433 93.2041