Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2860 ATGGAAAAGTATGAGGCTGTCAAGGATTTGGGAGCTGGGAATTTTGGGGTGGCCAGGCTCATGAGGAACAAGGAGACCAAGGAGCTTGTCGCCATGAAATACATCGAGCGTGGCCAAAAGATTGACGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGGCATCCCAATATAATTCGCTTCAAGGAGGTGGTTTTGACCCCCACTCATTTAGCCATAGTGATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGGATATGCAATGCTGGCAGGTTCAGTGAAGATGAGGCTAGATACTTCTTTCAGCAGCTTATTTCTGGTGTGCACTACTGTCATGCCATGCAAATTTGCCACAGAGATTTGAAGTTAGAAAACACACTTTTAGATGGAAGCCCTGCACCCCGCTTGAAAATTTGTGACTTTGGCTATTCCAAGTCATCTCTGCTTCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCCAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGCGTGACTCTTTATGTCATGCTGGTTGGAGCTTATCCTTTTGAGGATCAGGATGACCCTAGGAATTTCAGGAAAACAATTCAGCGAATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGAGAATCTCCCTCAAGGAAATTAAGAACCACCCATGGTTTTTAAAGAATCTTCCAAGAGAGCTAACTGAATCAGCTCAAGCTGTCTATTACCAGAGAGGCAACCCAAGCTTTTCTGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCAAGGGACCCTCCTCCAGTATCCAGGCCTGTGAAAGGTTTTGGCTGGGAAGGCGAAGAAGACGAAGGGGAAGAAGACGAAGGGGAAGAAGATGTGGAGGAAGAGGAGGATGAAGAAGATGAGTATGACAAGAGGGTCAAAGAAGTTCATGCAAGTGGAGAATTTCAGATCAGTTAA 1071 0.4482 MEKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGQKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRISLKEIKNHPWFLKNLPRELTESAQAVYYQRGNPSFSVQSVEEIMKIVGEARDPPPVSRPVKGFGWEGEEDEGEEDEGEEDVEEEEDEEDEYDKRVKEVHASGEFQIS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2860 356 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2860 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pvu2g2860 356 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pvu2g2860 356 Coils Coil 323 350 - -
Pvu2g2860 356 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2860 356 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Pvu2g2860 356 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Pvu2g2860 356 MobiDBLite consensus disorder prediction 300 356 - -
Pvu2g2860 356 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 349 - -
Pvu2g2860 356 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pvu2g2860 356 CDD STKc_SnRK2 3 259 - -
Pvu2g2860 356 MobiDBLite consensus disorder prediction 316 340 - -
Pvu2g2860 356 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2860 356 PANTHER SERINE/THREONINE KINASE 2 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2860 Pvu-Chr2 44241535 44245616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2860 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.593 6.42e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu2g2860 Pkinase 5.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2860 K14498 - gmx:547968 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2860 2 44241535 44245616 Pvu9g1630 9 22899948 22903459 PCT