Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2857 ATGGCCTTAGCCATGGTTCGTAGGAACGTCATCACCCACTACTCCAAGTTTGCATCTTCTTGGTCTGTGTTGTCTCGCCATTCCTCAATCCAAGAACCTCTCTTGGCGTCTGTTTCTTCTTTTCATAGTCAATCTGTTGGTGGTGGGAGTGGTGGTGGTGGTGGTGGATTGCCATCTTACATGCGCGGAGCTGTGTTTTGGGAACCCAATAAGCCTCTTTCAATCGAAGAATTTAACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAGACCAAGGCCTGTGGAGTATGCCACTCTGATCTGCATGTTATGAAAGGTGAAATTCCTTTTTCCAGTCCTTCTGTTCTGGGGCATGAGATTACTGGTGAGGTTGTTGAACATGGAGCACTCTCTGACAGCAAAACAATTGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGGACCCTCTATGATGGTGAAACTAGACTCTTTCTTCGAAACAGTGGAAAACCAGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGCGTTGTGCCAGCAAATGGAGTGTCTGTACTACCAGAATCATTGCCATATCCAAAGTCTGCTATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGCTCTAGCTGTTTACAGATAGCTAGAGCCTTTGGTGCTTCGGATATAATTGCTGTGGATGTTAACGATGAAAAGCTTCAGAAAGCAAAGATATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATATATGAAATTACTGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAAACACAGACATTTGCTCAGTGCACACTAAGTGTGAAGGATGGTGGAAAAGCCGTAATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGCAGAAAGATACAAGTTATTGGCTCGTATGGAGGCAGGGCGAGGCAAGATCTTCCAAAGCTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGACCATGCTGTTTCTAGAACATACACTTTTGAGGAGGCAGACAAAGCATTCCAAGATCTCAATGAAGGAAAAATTATTGGCCGAGCTGTGATCGAGATAATGTAA 1299 0.4503 MALAMVRRNVITHYSKFASSWSVLSRHSSIQEPLLASVSSFHSQSVGGGSGGGGGGLPSYMRGAVFWEPNKPLSIEEFNMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPSVLGHEITGEVVEHGALSDSKTIERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVFMYSMGGLAEYCVVPANGVSVLPESLPYPKSAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVNDEKLQKAKIFGATHTVNSAKEDPIEKIYEITGGKGVDVAVEALGKTQTFAQCTLSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLDHAVSRTYTFEEADKAFQDLNEGKIIGRAVIEIM* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2857 432 Gene3D - 65 421 - -
Pvu2g2857 432 SMART PKS_ER_names_mod 68 429 IPR020843 GO:0016491
Pvu2g2857 432 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 118 132 IPR002328 GO:0008270|GO:0016491
Pvu2g2857 432 Gene3D - 238 375 - -
Pvu2g2857 432 Pfam Zinc-binding dehydrogenase 261 392 IPR013149 -
Pvu2g2857 432 Pfam Alcohol dehydrogenase GroES-like domain 86 216 IPR013154 -
Pvu2g2857 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 223 396 IPR036291 -
Pvu2g2857 432 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 61 431 - -
Pvu2g2857 432 SUPERFAMILY GroES-like 59 257 IPR011032 -
Pvu2g2857 432 CDD Zn_ADH10 61 430 - -
Pvu2g2857 432 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 61 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2857 Pvu-Chr2 44185200 44188961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2857 75 431 Monolignol Biosynthesis Gene Families AT4G37990 26.099 5.52e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2857 - - gmx:100802431 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2857 2 44185200 44188961 Pvu2g2857 2 44185200 44188961 ECH