Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2848 ATGGGAAGTCCTCCGGTGAATGCGTCGGCAGTAGCATACGAAGCATGGACAAGCCTGGCGGTGCCGGATTGGTTGAACAAAGGAGACAACGCATGGCAAATGGTGTCAGCCACGCTGGTGGGGATCCAAAGCATGCCGGGCCTCGTCATTCTCTACGGAAGCATCGTCAAAAAGAAATGGGCCGTCAACTCTGCCTTCATGGCTCTCTACGCTTTTGCGGCGGTTGTCATCTGCTGGGTCACCTGGGCCTACAAGATGTCCTTCGGGGAGAAGCTGCTGCCGTTTTGGGGCAAGGCTGGGCCGGCGCTGGGCCAGAGGTTTCTCATAAAGCAGGCGGGCCTCCCCGCCACGCCGCACTACTTCAGTAACGGCGAGTTGGAGACGGCGGAGATCGAACCCTTTTACCCCATGGCTACTATGGTCTGGTTCCAGTGCGTGTTCGCGGCCATTGCTCTTGTGATCTTGGCTGGCTCCGTTCTGGCTCGGATGAACTTCAAGGCCTGGATGATGTTCGTGCCGCTCTGGCTCACTTTCTCTTACACCATCGGCGCCTTCAGCTTGTGGGGCGGAGGCTTCTTGTTCCACTGGGGCGTCATCGACTACTCCGGCGGTTACGTCATTCATCTCTCTTCTGGGATTGCTGGCTTCACTGCAGCGTATTGGGTGGGGCCAAGATCGAAGAGGGACAGAGAGAGGTTCCCGCCAAACAATGTGTTACTGATGTTGGCAGGTGCGGGGCTGCTATGGTTGGGATGGGCGGGTTTCAACGGAGGAGATCCCTACGCGGCGAACACGGACTCATCGATAGCGGTGCTGAACACCAACGTTTGCGCCGCCACCAGCCTCCTCGTATGGACCTGGTTGGACGTTATTTTCTTCAAAAAGCCCTCAGTTATTGGAGCCGTTCAGGGCATGATAACAGGCCTTGTTTGCATCACTCCCGGAGCTGGTGTGGTTCAAGGATGGGCTGCCATAGTGATGGGAGTGCTTTCAGGAAGTATCCCATGGTTCAGCATGATGGTGCTGGGAAAAAAGTTGAAAATATTTCAAATGGTTGATGACACTCTTGCTGTGTTCCACACTCATGCTGTGGCTGGCCTCCTTGGAGGAATACTCACTGGCCTATTTGCTGAGCCACATCTAAGCACACTCTTTCTTCCTGTCACCAATTCCAAAGGAGGAATCTATGGAGGCCCTGGAGGAATCCAGATTCTTAAGCAAATTGTAGGAGCTCTGTTCATCATTGGGTGGAACCTTGTGGCCACTTCAATTATTTGTGTGCTTATTAACTTCTTAGTTCCACTTAGAATGTCAGAGGAAGAGCTTCTCATTGGGGATGATGCAGTTCATGGGGAAGAGGCTTATGCACTCTGGGGCGATGGAGAAAAACTTACCATCTACAAAGATGATACCACACACCATGGAATGGTGTCTAGTGGTGCCACTCAAGTGGTCTAA 1458 0.5322 MGSPPVNASAVAYEAWTSLAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGEKLLPFWGKAGPALGQRFLIKQAGLPATPHYFSNGELETAEIEPFYPMATMVWFQCVFAAIALVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRSKRDRERFPPNNVLLMLAGAGLLWLGWAGFNGGDPYAANTDSSIAVLNTNVCAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGVVQGWAAIVMGVLSGSIPWFSMMVLGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPHLSTLFLPVTNSKGGIYGGPGGIQILKQIVGALFIIGWNLVATSIICVLINFLVPLRMSEEELLIGDDAVHGEEAYALWGDGEKLTIYKDDTTHHGMVSSGATQVV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2848 485 TIGRFAM amt: ammonium transporter 29 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu2g2848 485 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pvu2g2848 485 PRINTS Rhesus blood group protein signature 144 160 IPR002229 GO:0005887
Pvu2g2848 485 PRINTS Rhesus blood group protein signature 239 257 IPR002229 GO:0005887
Pvu2g2848 485 PRINTS Rhesus blood group protein signature 270 292 IPR002229 GO:0005887
Pvu2g2848 485 PRINTS Rhesus blood group protein signature 325 343 IPR002229 GO:0005887
Pvu2g2848 485 PANTHER AMMONIUM TRANSPORTER MEP2 17 479 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu2g2848 485 PANTHER AMMONIUM TRANSPORTER 17 479 - -
Pvu2g2848 485 SUPERFAMILY Ammonium transporter 24 437 - -
Pvu2g2848 485 Gene3D Ammonium transporter AmtB like domains 6 458 IPR029020 -
Pvu2g2848 485 Pfam Ammonium Transporter Family 31 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2848 Pvu-Chr2 44096916 44101181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2848 137 474 Inorganic Solute Cotransporters AT2G38290 71.598 2.10e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2848 K03320 - gmx:100785993 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2848 2 44096916 44101181 Pvu2g2848 2 44096916 44101181 ECH