Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2847 ATGTTTCGCCCAAATTTTAGCAGGGGTCCTCTCAAAATATTGACGAGGTGGCTCATATTCCTCACAATCTTGACAGTCAGTTCAGCTATCAAAGATCCTGATGTAGAAGGTGAAGCTCTGCTTGATCTTTTACATTTCCTGAATGATTCCAATAAGCAAATAACGGACTGGGACAGTCATTTAGTTAGCCCGTGCTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTCATATCACTGGCCCTGGGTTCGGTTGGATTTGTTGGAACACTGTCTCCCTCGATTACCAAGTTGAAATATTTGGTTAGCGTGGAACTGCAGAACAACAATCTTTCAGGACCCTTGCCTGATTACATTTCCTACTTGAAAGACCTACAGTATCTAAATCTTGCTGACAATAATTTTAATGGTTCTATACCAGATAAATGGGATGAACTATCCAATCTAAAGTATATGGATCTTTCATCTAATGGTCTTACTGGAAGAATCCCAACACAACTGTTTTCAGTTCCAATGTTTAACTTTTCAGATACGCACCTTCAGTGCGGTCCTGGCTTTGAGCAGACTTGCACTTCGAAATCTGAAAATCCAGATTCAACCCACAAATCAAAAATGGCAAAAATTGTACGTTATGCAAGTTGTGGTGCCTTTGCACTTCTGTGTCTTGGGGCTATCCTTACATATCGACACCATCAAATGCATAAGCACAAAAAGGAAGTCTTTGTTGATGTTTCAGGTGAAGACGAAAGCAAAATCTCCTTCGGGCAATTGAGAAGATTTTCTTGGCGTGAACTACAACTTGCCACCAAAAATTTCAGTGAAGCCAATATAATTGGTCAGGGTGGCTTTGGAAAAGTGTACAAAGGAGTACTCTCTGATAACACCAAAGTAGCTGTGAAACGCCTAGTTGATTATCACAATCCTGGTGGAGAGGCTGCATTCGAGAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAACCTCTTAAGGCTAATTGGCTTCTGCACAACCTCAACTGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTTAGTGTAGCTTATCGACTGAGAGATTTAAAACCAGGTGAGAAAGGCTTGGACTGGCCAACAAGAAAACGTGTGGCTTTTGGCACAGCCCATGGTTTGGAGTATCTGCATGAGCAATGCAATCCAAAGATAATACATCGTGATCTAAAGGCTGCAAATATCCTTTTAGATAATGAATTTGAAGCTGTTCTTGGTGATTTTGGGCTAGCCAAGCTGGTTGATGCAAGGATTACTCATGTCACCACTCAAGTGCGTGGCACAATGGGTCACATTGCCCCAGAATATTTGTCCACTGGAAAATCTTCAGAGAAGACTGATGTATTTGGATATGGCATAACACTTCTTGAACTAGTCACCGGTGAGCGTGCAATAGACCTCTCTCGGCTTGAAGAGGACGAGGATGTTCTTCTCATCGATTATGTCAAAAAGCTGCTGAGAGAAGAAAGGTTGGAGGACATTGTGGATAGAAATTTGGAGAGTTATGATCCAAAGGAAGTTGAGACCATCCTTCAGGTTGCAATGCTTTGCACCCAAGGCTACCCTGAGGATCGTCCAACCATGTCAGCCGTGGTAAAATTGCTGCAGGGAGTGGGGTTGGCAGATAGATGGGCTGACTGGCAGCAACTTGAAGAGGCTAGGAATCAAGAATTCTCACTAATGACTCACCAATTTGTTTGGCATGTTGAATCTACACTTGATCAAGAAGCTATACAGCTTTCCAGAGCAAGATAA 1788 0.4211 MFRPNFSRGPLKILTRWLIFLTILTVSSAIKDPDVEGEALLDLLHFLNDSNKQITDWDSHLVSPCFSWSHVTCRNGHVISLALGSVGFVGTLSPSITKLKYLVSVELQNNNLSGPLPDYISYLKDLQYLNLADNNFNGSIPDKWDELSNLKYMDLSSNGLTGRIPTQLFSVPMFNFSDTHLQCGPGFEQTCTSKSENPDSTHKSKMAKIVRYASCGAFALLCLGAILTYRHHQMHKHKKEVFVDVSGEDESKISFGQLRRFSWRELQLATKNFSEANIIGQGGFGKVYKGVLSDNTKVAVKRLVDYHNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDNEFEAVLGDFGLAKLVDARITHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGERAIDLSRLEEDEDVLLIDYVKKLLREERLEDIVDRNLESYDPKEVETILQVAMLCTQGYPEDRPTMSAVVKLLQGVGLADRWADWQQLEEARNQEFSLMTHQFVWHVESTLDQEAIQLSRAR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2847 595 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 595 - -
Pvu2g2847 595 Gene3D Ribonuclease Inhibitor 33 200 IPR032675 -
Pvu2g2847 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Pvu2g2847 595 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Pvu2g2847 595 PANTHER LRR RECEPTOR-LIKE KINASE 13 595 - -
Pvu2g2847 595 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Pvu2g2847 595 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2847 595 SUPERFAMILY Protein kinase-like (PK-like) 251 546 IPR011009 -
Pvu2g2847 595 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2847 595 Pfam Protein kinase domain 274 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2847 595 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Pvu2g2847 595 SUPERFAMILY L domain-like 37 172 - -
Pvu2g2847 595 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
Pvu2g2847 595 Gene3D Transferase(Phosphotransferase) domain 1 350 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2847 Pvu-Chr2 44087995 44094938 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2847 18 590 Receptor kinase-like Gene Family AT5G65240 55.058 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pvu2g2847 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2847 - - gmx:100799227 1102.04