Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2837 ATGTTTGAAATGGCTCTGTCACTGTGGAGAAGTCGCACTGCTTCATCAACACTGCACTTGTTTGCCAATACTCTTCGCGGATTCTCTTCTGAGGTGACAAACTCCAGTGCTCAAAAAACGCGAGAGATTATGATGAATCAAATGATGTATTCTGACATAAACTCAAGAATTGGGAGTTGCATGCCACTGTCTGCAATGCGAATTGGAACAATCATTCACAACATTGAATTGAACCCAGGGCAAGGTGGCAAGCTTGTCCGAGCTGCAGGAACAAGTGCAAAGATCTTGAAAGAGCCCACATCAGCATACTGTTTAATCCAGATGCCCTCTGGTGTTAAAAAGTTAATTGATTCTCGGTGTAGGGCCACTGTTGGTGTTGTGTCTAATCCAAGTCATGGGGATCGCAAGCTTAGGAAGGCCGGACACAGCCGATGGCTTGGTCGAAGACCTGTTGTTCGAGGAGTGGCAATGAATGCCGTAGATCATCCTCACGGTGGAGGAAGGGGTAAAAGCAAGAGTAGTGGAAAATTTGGGCAAGTATCACGCACTCCTTGGGGCAAGCCAACTAAGAGTGGCTATAAGACAGGACCCCTTAAGCGCAGAAGGTAG 609 0.4696 MFEMALSLWRSRTASSTLHLFANTLRGFSSEVTNSSAQKTREIMMNQMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPTSAYCLIQMPSGVKKLIDSRCRATVGVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNAVDHPHGGGRGKSKSSGKFGQVSRTPWGKPTKSGYKTGPLKRRR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2837 202 ProSitePatterns Ribosomal protein L2 signature. 150 161 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pvu2g2837 202 Gene3D - 51 127 IPR014722 -
Pvu2g2837 202 SMART Ribosomal_L2_C_2 55 188 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pvu2g2837 202 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 39 202 - -
Pvu2g2837 202 MobiDBLite consensus disorder prediction 174 188 - -
Pvu2g2837 202 Pfam Ribosomal Proteins L2, C-terminal domain 57 186 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pvu2g2837 202 MobiDBLite consensus disorder prediction 159 202 - -
Pvu2g2837 202 Gene3D Ribosomal protein L2, domain 3 128 202 IPR014726 -
Pvu2g2837 202 PANTHER RIBOSOMAL PROTEIN L2 39 202 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pvu2g2837 202 SUPERFAMILY Translation proteins SH3-like domain 57 191 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2837 Pvu-Chr2 44006486 44008278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2837 47 167 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.310 4.42e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2837 - - gmx:100792418 342.043