Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2833 ATGGGTGACGGAAGTGGGAGCCGGTGGAGCAGGGCGGAGTGGGTGCAGCAATACGATCTGTTAGGTAAAATCGGCGAAGGCACTTACGGCCTAGTTTTTCTGGCAAGAACCAAAACCCCTTCTCCCTCCAAATCCATCGCCATCAAGAAGTTCAAGCAGTCTAAGGACGGGGACGGCGTCTCCCCCACCGCCATCCGAGAAATCATGTTGTTGAGGGAGATTACGCACGAGAACGTCGTGAAGCTCGTCAATGTCCACATCAACCACGCCGACATGTCGCTCTACCTCGCCTTCGATTACGCCGAGCACGATCTTTATGAAATTATTAGGCATCACAGGGACAAACTCAACCATTCCATTAATCAATACACCGTTAAGTCTTTGCTCTGGCAGTTACTCAATGGATTGACTTATCTGCACAGTAATTGGATGATACACCGAGACTTGAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAGGAGCATGGAGTTGTTAAGATTGCTGACTTTGGACTTGCAAGGATATATCAAGCTCCTCTGAAGTCACTATCTGATAATGGGGTTGTTGTAACTATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCAGTGGGATGCATTTTTGCCGAGTTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCGTTTCAGCTTGACCAACTTGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCGTTGGCAAGTCTTCAACATTGGCAACAAGATGTGCAACATATACAAGGACGCAAATATGACAACACCGGTCTCTACAATGTTGTGCACCTATCTACAAAAAGTCCTGCATACGACCTCTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCCCTTGTACCATGTCAACTTGGAGAGAAAATTGTAAATTATCCCACTCGTCCAGTGGACAACACAACTGATCTTGAAGGGACAACCAATCTGCCACCTTCACAAGCGGTAACTGCAGTTTCTGGCAGCATGCCTGGTGCTCATGGGTCTAATAGATCTGTCCCTCGGCCAATGAATGTTGTTGGAATGCCAAGATTGCCACCTCAGGCAATGGCAGCTTATAACCTCACATCTCAGGCAGCCATGGGAGATGGAATGAATCCTGGGAGTATCTCAAAGCAACGAGGTGTTCCACAGGGCCATCCACAACAGTTGAGAAGGAAGGAGCAAATGGGGATGCCGGGATACCCTTCACAACAGAAGTCAAGACGAATATAA 1386 0.4639 MGDGSGSRWSRAEWVQQYDLLGKIGEGTYGLVFLARTKTPSPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLTYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKSLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLGHPTLEKWPSLASLQHWQQDVQHIQGRKYDNTGLYNVVHLSTKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDNTTDLEGTTNLPPSQAVTAVSGSMPGAHGSNRSVPRPMNVVGMPRLPPQAMAAYNLTSQAAMGDGMNPGSISKQRGVPQGHPQQLRRKEQMGMPGYPSQQKSRRI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2833 461 MobiDBLite consensus disorder prediction 375 394 - -
Pvu2g2833 461 SUPERFAMILY Protein kinase-like (PK-like) 13 328 IPR011009 -
Pvu2g2833 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Pvu2g2833 461 SMART serkin_6 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2833 461 PANTHER CYCLIN-DEPENDENT KINASE E-1 8 460 - -
Pvu2g2833 461 ProSitePatterns Protein kinases ATP-binding region signature. 24 50 IPR017441 GO:0005524
Pvu2g2833 461 MobiDBLite consensus disorder prediction 416 461 - -
Pvu2g2833 461 PANTHER CELL DIVISION PROTEIN KINASE 8 460 - -
Pvu2g2833 461 Gene3D Transferase(Phosphotransferase) domain 1 100 343 - -
Pvu2g2833 461 ProSiteProfiles Protein kinase domain profile. 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2833 461 Gene3D Phosphorylase Kinase; domain 1 5 99 - -
Pvu2g2833 461 CDD STKc_CDK8_like 17 327 - -
Pvu2g2833 461 Pfam Protein kinase domain 18 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2833 Pvu-Chr2 43958991 43970054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2833 1 461 Core Cell Cycle Gene Families AT5G63610 74.947 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Pvu2g2833 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2833 K02208 - gmx:100794990 894.804