Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2831 ATGGGCAGAGAAAATGATTTAGCAAGAACAAAGGAAGAAGTCAGTGATGATGGTTCCTCGACTCTTGAGAATGGGGATTTAGAATCTCATGCTCGAATTAGTCTGGACAAGGAAGGCTTGGAAACTTGTCGTGTGTGCCAATGTACTGAATCTGATAAAAGGGCAGATGCGGCGCTAGAATTTCTGGGCATCACCCCGGGTTCAGAATTGTGTAAAAGCAAGGGGGAAGTAGGGTGTGATGGCAATGGAATTCCCAGAAATATGTCTCTTAACAGAAACATTGAAAACAATACAGGGATGGTGGAATTTGTAAGCCCCGATGGGGAGGTTTTCATTTGTAAAAGCGATTTGGAACTTGGTTTGTCTCATCAAGATAAACTAATTGAACTGGGATGTTCTTGTAAAAACGATCTTGCTTTAGTACATTATGCTTGTGCACTCAAGTGGTTTGTCAACCATGGATCTACCATTTGTGAAATATGTGGACATATAGCAAATAATATCAGAGTTTCTGACTTCAATAAGGTTGTTGGAGCTTTGAAGGAGTATGAAGTATTGAGGGAAAGAACTGCTAGTGGTGATCCTGGTCTCGCACAAGCTCGTGCAAATGCTGGTGTGGATCCTGATGCAGTGGCTGCTATTCGGAGGCAACGGCTAAGTGAGATTGCACTATGGTTTTGTCCTCATAATAGCAGTACCAATAACAACGTTAGCAATGTGGACACACTTTCACAGGTTGCTTCTGAGCAGCCTTTGAGCATTGTTACTGAAGATGTTGTCCCTGTACAGAATACTGCAACTAAATGGGCCGTGGAGGGTACAGGTATCCTGCTTGCTACGGGGCTGCTTACCATCACCCTTGCATGGCTTATAGCCCCTCGTGTTGGAAAGAAAACTGCTAGAAGTGGTCTTCATATCTTACTTGGAGGGGTATGTGCTTTAGCAGTGGTGGTTTTCTTCCGCTTTTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTGGTCTTCGGAATATGGGCGTCAAGGACCCATGGTGCCCATACAACATGA 1083 0.4395 MGRENDLARTKEEVSDDGSSTLENGDLESHARISLDKEGLETCRVCQCTESDKRADAALEFLGITPGSELCKSKGEVGCDGNGIPRNMSLNRNIENNTGMVEFVSPDGEVFICKSDLELGLSHQDKLIELGCSCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRVSDFNKVVGALKEYEVLRERTASGDPGLAQARANAGVDPDAVAAIRRQRLSEIALWFCPHNSSTNNNVSNVDTLSQVASEQPLSIVTEDVVPVQNTATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALAVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2831 360 MobiDBLite consensus disorder prediction 1 30 - -
Pvu2g2831 360 ProSiteProfiles Zinc finger RING-CH-type profile. 102 168 IPR011016 GO:0008270
Pvu2g2831 360 PANTHER ZINC FINGER, RING-CH-TYPE 19 359 - -
Pvu2g2831 360 SUPERFAMILY RING/U-box 125 164 - -
Pvu2g2831 360 Pfam RING-variant domain 125 161 IPR011016 GO:0008270
Pvu2g2831 360 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 359 - -
Pvu2g2831 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 164 IPR013083 -
Pvu2g2831 360 SMART ringv_2 112 162 IPR011016 GO:0008270
Pvu2g2831 360 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2831 Pvu-Chr2 43945927 43951082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2831 1 350 C3H Transcription Factor Family AT5G08750 64.543 1.30e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2831 - - gmx:100805323 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2831 2 43945927 43951082 Pvu2g2831 2 43945927 43951082 ECH