Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2828 ATGCAAGGACAACTGGAATTACCACCCGGGTTTAGATTCCACCCCACTGACGATGAACTCGTGAACCACTACTTGTGTACCAAGTGTGCTGCTCACTCCATTGCTGCTCCCATCATCAAAGAAATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGACATGGCTCTTTACGGTGAGAAAGAGTGGTACTTTTTCTCCCCTCGAGACCGAAAATACCCAAACGGTTCACGACCGAACCGGGCGGCCGGGACCGGGTACTGGAAGGCCACCGGAGCGGATAAACCGATTGGAAAACCGAAAGCCCTTGGAATTAAGAAAGCCCTTGTGTTCTACGCGGGGAAAGCCCCGAAAGGAGTGAAGACCAATTGGATCATGCACGAATATCGCTTGGCCAACGTCGATAGATCTGCCTCCAAGAAAAACAACAATTTGAGGCTTGATGATTGGGTGCTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAATAATAGCGATGCTGTGGTGGATCAGAAACCGGCGAATTTACCCGAAGAGGTTTTGTTCCAGCCCGAGATGAAGCCTGACATCAAGATGTACGGCCACGATCATTTCAGGAACAGCCAATTGTACATGAACACGTCGGATTCGGTGCCGAGGTTAAATACAGACTCTAGCTGCTCGGAGCACGTGGTTTCGCCGGACGGCACCTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAACGACCTCGAGTTGGGCCCGGACCTGGTTTCGGGCTTCGATTTTAATTTCATGGAGATGTCGGCAAATGACGCTTTTGCCCCTCAAACCCAATACCAAATCAACCAGCCCCCGTGGCTCGATATGTTCTCGTACCTTCCCAAGACATTTTAA 885 0.5028 MQGQLELPPGFRFHPTDDELVNHYLCTKCAAHSIAAPIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNNSDAVVDQKPANLPEEVLFQPEMKPDIKMYGHDHFRNSQLYMNTSDSVPRLNTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDLVSGFDFNFMEMSANDAFAPQTQYQINQPPWLDMFSYLPKTF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2828 294 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pvu2g2828 294 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Pvu2g2828 294 PANTHER NAC TRANSCRIPTION FACTOR 56 5 272 - -
Pvu2g2828 294 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Pvu2g2828 294 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 272 - -
Pvu2g2828 294 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2828 Pvu-Chr2 43924974 43926594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2828 1 294 NAC Transcription Factor Family AT1G01720 59.539 2.00e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g2828 NAM 7.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2828 - - gmx:100170751 529.635