Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2810 ATGCAAGGCTGTGAGGTTGAGGCCGTTGGCATAAACTACACCGTCCACACACACAAATCGGAGCACCCTTTTAAACTCTTCAGCAAATCTGCACAACTTGACACTGAACAAGATGGTAAAGAGCCAGAAGAGGAAGCAGAAGCTGAACATAGTTGCAGTGGAGTAAGGCATGTGCTGAAGAATGTGAGTTTCCAAGCCAAACCATGGGAGATCCTTGCAATTGTTGGGCCAAGTGGAGCAGGCAAATCATCACTGCTTGAGATTCTAGCTGGAAAACATAGCCTTCAAAGTGGTACTGTGTTGGTGAACCACAAGCCTGTGGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTGACACAAAAGGACACTTTGTTTCCTTTGCTTACAGCTGAAGAAACCCTGATGTTTAGTGCAAAGCTGAGGCTGAAGCTTTCTAAGGAGGAACTTTGCTGCAGGGTCAAGTCATTGATTAAGGAGCTTGGACTTGACCACGTTGCTGACACTAGAATTGGCGATGATAGGGTCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGACAGTACTTCGGCTCTGCAAATAATTGACATGCTTAAGGTCATGGCTGACACAAGAGGTAGAACTATAATCCTTAGTATCCATCAACCCGGGTTCAGAATAGTGAAGCTGTTCAGTTCATTGTTGTTGTTGGCCAATGGAAGTGTTTTGCACCATGGAACTGCTGAGTTGCTTGGTGTAAATCTAAGGTTGAGCGGTTTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGATACCATTCAGCAACAACAGAAATGTGTGCCAGTTCAGGTGGAAACTCCAAGGCAATTGCCGGGGACAATGCAACAGAAGAAAGTTGATGATGAAGCCGGTGAGATTAGGAATGGTAAGTTTACCTTGCAACAGCTGTTTCAGCAATCCAAGGTAATTGATGAAGAAACCATCTACGTTGGAATGGATTTCACATCTGATTTTGCTAATTCTAGATTGACAGAAACTATGATTCTCACTCATAGGTTCTCCAAGAACATATTTCGTACAAAAGAGCTATTTGCTTGTAGGACAATTCAGATGCTGGTTTCTGGGTTGGTTGTGGGTTCCATCTTTTGTAACCTTAAGGATGATCTAGAGGGAGCTTATGAAAGGGTGGGTCTATTTGCTTTCATATTAACGTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCCATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCTTGTGGAAGCTACCGTGTGTCATCCTATGCAATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTTGGTCTCAACCGGAATTTCTTGGCCTTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGTTTTAGTGCTCTGGTGCCTAATTTTATTGTTGGTAATTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTGTTCTCTGGGTACTTCATATCAAAGCAAGAAATTCCAAATTACTGGATTTTCATGCATTATTTATCCTTGTTCAAGTATCCTTTTGAAGGGTTCCTGATCAACGAGTTCTCCAACTCGGGGAAGTGCTTGGAGCACATGTTTGGGGCATGTCTTAAGAGCGGAGAGGATGTGCTTGAAGAAGAAGGGTACGGGGGAGAGAGTAACAGATGGAAGAATGTTGGGGTTACTGTGTGCTTCATCTTGGTTTACAGGTTCATCGCTTATGTTATTCTTAGATACAGATGTTCCCAAAGGAGATTTGGCAAGGTTTTCACCAACTAA 1941 0.4307 MQGCEVEAVGINYTVHTHKSEHPFKLFSKSAQLDTEQDGKEPEEEAEAEHSCSGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSLQSGTVLVNHKPVDKAQFRKLSGYVTQKDTLFPLLTAEETLMFSAKLRLKLSKEELCCRVKSLIKELGLDHVADTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFSSLLLLANGSVLHHGTAELLGVNLRLSGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLPGTMQQKKVDDEAGEIRNGKFTLQQLFQQSKVIDEETIYVGMDFTSDFANSRLTETMILTHRFSKNIFRTKELFACRTIQMLVSGLVVGSIFCNLKDDLEGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYLSLFKYPFEGFLINEFSNSGKCLEHMFGACLKSGEDVLEEEGYGGESNRWKNVGVTVCFILVYRFIAYVILRYRCSQRRFGKVFTN* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2810 646 SMART AAA_5 68 257 IPR003593 -
Pvu2g2810 646 Gene3D - 47 305 IPR027417 -
Pvu2g2810 646 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
Pvu2g2810 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 280 IPR003439 GO:0005524
Pvu2g2810 646 Pfam ABC-2 type transporter 367 576 IPR013525 GO:0016020|GO:0140359
Pvu2g2810 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 634 - -
Pvu2g2810 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 264 IPR027417 -
Pvu2g2810 646 Pfam ABC transporter 59 207 IPR003439 GO:0005524
Pvu2g2810 646 MobiDBLite consensus disorder prediction 32 51 - -
Pvu2g2810 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 2 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2810 Pvu-Chr2 43806634 43808574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2810 58 291 Calmodulin-binding Proteins AT2G36910 26.230 1.97e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2810 K05681 - gmx:100789722 1153.66