Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2798 ATGCCGGCGTGGTGGAGTAGAAAGTGGAGCAAGACCAAGGAGGACCACGAGGAGCCCGAGGAGGAGGAGGACGAAGAGCCACGTGCCGGGTTTCCGTTGAGTTTCATGAAATCTCCGGTCGCCGTTCGGAGGGCTCAGCTCAGTAAGAGTAAGAAGAACAAGAAGAAGCCCAAGAGCTTCGACGACAAGCTCAAAGGGCTTCCGTTGCCTCGTCCCACGCACACTCACACCGATCAAATTCAAACGTTTGGATCTCTCTCGGTGTCGGGTTCCAGCGTCAGCTCCTCCACCTCCTTCGACGATCACCCAATTTCGCCTCACTTTAATGCCAACAGAGGACAAGATGAGGTGAGGTTCAATGTGAGGTCAAAAAGTCCTGGCCCTGGGTCAAGAGGACCTACTAGTCCTACCTCACCGCTTCATCCAAGGTTGCATGCTTTGAGTCTTGACTCTCCTACGGGGAAGCAAGACGAGAGAAGGAGTGAGTGTCATCCGTTGCCTCTTCCTCCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAATTCCATCACACGACCAAATGGACTGTTGGAAAATGCTACCAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCATGTGTATCTGGGATTCAATAGTGAAAATGGGCAGATGTGTGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAACTTTCACACCCTAATATTGTTCAATACTACGGGAGCGAACTGGTAGAAGAATCACTTTCCGTATATTTGGAATTTGTCTCTGGTGGTTCTATCCAAAAGTTACTTCAGGAGTATGGTCCATTTAAGGAACCTGTTATTCAAAATTATACCAGGAAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAATACGGTACACAGGGATATTAAAGGGGCAAACATTCTAGTTGATCCTAATGGTGAAATCAAATTGGCTGACTTTGGAATGGCTAAACATATAACTTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAATGGCTATAGTCTTCCGGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCAGAAATCCCTGAGCATCTTTCCAGTGATGCAAAAAATTTCATCAAGTTATGCTTACAAAGAGACCCATCTGCTCGCCCAACGGCCCAAAAGTTACTAGACCACCATCCCTTCATTCAAGATCAATCAGCAACAAAAGCTGCAAATGTCAGCATAACTAGAGATGCTTTCCCTTACGTGTCTGATGGAAGCCGGACACCGCCTGTGTTAGAGTCCCATTCGAACCGAACAAGTATAACTTCCCTCGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCCCCACGTGCGTTAAGAAGTCCAAGAGATAGCACAAGAATGATCACATCTTTACCTGTATCTCCCTCTTCAAGTCCATTGCGACGGTATGGGCCAACGCACCAGAGCTGTTTCTTTTCTCCTCCTCATCCAGCTTATACAATAATGGGACAAAGTAGTTACACTTTGAATGACGCATGCTCATTTCCTGTAAGGTCAAATGCCACGTTGACTCTTGATCCTCGGCATGAAACATCTCGGTACAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA 1827 0.4581 MPAWWSRKWSKTKEDHEEPEEEEDEEPRAGFPLSFMKSPVAVRRAQLSKSKKNKKKPKSFDDKLKGLPLPRPTHTHTDQIQTFGSLSVSGSSVSSSTSFDDHPISPHFNANRGQDEVRFNVRSKSPGPGSRGPTSPTSPLHPRLHALSLDSPTGKQDERRSECHPLPLPPGSPTSPSSVLSNSITRPNGLLENATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLSVYLEFVSGGSIQKLLQEYGPFKEPVIQNYTRKIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHITSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSSDAKNFIKLCLQRDPSARPTAQKLLDHHPFIQDQSATKAANVSITRDAFPYVSDGSRTPPVLESHSNRTSITSLDGDYASKPALAAPRALRSPRDSTRMITSLPVSPSSSPLRRYGPTHQSCFFSPPHPAYTIMGQSSYTLNDACSFPVRSNATLTLDPRHETSRYKANTPPGGSPRMRLI* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2798 608 MobiDBLite consensus disorder prediction 55 69 - -
Pvu2g2798 608 MobiDBLite consensus disorder prediction 585 608 - -
Pvu2g2798 608 Gene3D Transferase(Phosphotransferase) domain 1 198 481 - -
Pvu2g2798 608 MobiDBLite consensus disorder prediction 1 188 - -
Pvu2g2798 608 Pfam Protein kinase domain 202 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2798 608 ProSiteProfiles Protein kinase domain profile. 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2798 608 MobiDBLite consensus disorder prediction 74 104 - -
Pvu2g2798 608 CDD STKc_MEKK1_plant 200 458 - -
Pvu2g2798 608 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524
Pvu2g2798 608 SMART serkin_6 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2798 608 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 589 - -
Pvu2g2798 608 PANTHER MAP KINASE KINASE KINASE 1 589 - -
Pvu2g2798 608 SUPERFAMILY Protein kinase-like (PK-like) 199 541 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2798 Pvu-Chr2 43728152 43733883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2798 1 521 MAP Kinase Kinase Kinase AT1G53570 57.643 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu2g2798 Pkinase 4.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2798 K04421 - gmx:100787064 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2798 2 43728152 43733883 Pvu2g2798 2 43728152 43733883 ECH
Pvu2g2798 2 43728152 43733883 Pvu9g1555 9 21926145 21932821 PCT