Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2794 ATGGCTGTAACGAAATTGGTACCGGGGTTTCGGTTCAACCCCTCTGGTGTCGAGTTGGTTGTGTACTTTCTGAAGAACAAAGTGATGGGGAAAAAGTTCTTTGGTGGTGTCATTACTGAACTTGACATATACAAGTATGCTCCCTGGGATCTCTCAGATAAGTCTTGTCTAAGAACTGGGGAATTGGAATGGTACTTTTTCTGCCCGCTGGAGAAGAAATATGGCAGTGGGAGTAGGATGAAACGATCTACTGAAATTGGGTACTGGAAAGCTACTGGGAACGATAGAGTTGTTCAGCACAATAATCGAACGGTGGGGATGATTAGAACACTGGTATTTCACCTGGGTAAATCGCCTAAAGGAAAAAGAACTGATTGGGTTATGCATGAGCATAGGCTTGAAGATAAGGACCTTGCTGACAAAGGAATTGTCCAGGATTCCTATGTGGTCTGCAAAGTATTTCAAAAGGACGGTGTTGGTCCTAGGAATGGTGCGCAATATGCAAGACCATTTAATGAGGAAGAGTGGAACGATGTAGAACTGGAAATACCTTTTAGTGCTTCAATTGCACCAGTTCCCATCTTGCCTATGATATCTGATGCTTCTGTCCGAAAGGACAATCCCCTCCCTGCTAGTGGATGTACATCATGTCTATCAAGATCAATGCCTTCACCTGGCACTGCTGATCCTTCTGATCCAAATGATCAAGCTGTTAACAATGATGATGAAGATATTTTACGCATGCTTGATATTTTTAAAGATGGTGACAAATTGTTTGAGGAGGATAATAATGATCTAGAAAACATTGCTGAAGGTGTACCACTTTTAGATGAACTTTTCGTGGGGTTGAAAGACTACTTGGCTTCTTCTCTTGCTGGTGTTTCCTCTTGCCAGAATGCTGAATTTAATACCAACGGAATGGTTACTACAGGTGATGTCGATGACTTGGACTTCCTAGAGTTAACTGACCTCGACATGCCATTGTTCTTGCCGAATACACAACCTTGA 1008 0.4246 MAVTKLVPGFRFNPSGVELVVYFLKNKVMGKKFFGGVITELDIYKYAPWDLSDKSCLRTGELEWYFFCPLEKKYGSGSRMKRSTEIGYWKATGNDRVVQHNNRTVGMIRTLVFHLGKSPKGKRTDWVMHEHRLEDKDLADKGIVQDSYVVCKVFQKDGVGPRNGAQYARPFNEEEWNDVELEIPFSASIAPVPILPMISDASVRKDNPLPASGCTSCLSRSMPSPGTADPSDPNDQAVNNDDEDILRMLDIFKDGDKLFEEDNNDLENIAEGVPLLDELFVGLKDYLASSLAGVSSCQNAEFNTNGMVTTGDVDDLDFLELTDLDMPLFLPNTQP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2794 335 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Pvu2g2794 335 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Pvu2g2794 335 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Pvu2g2794 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 233 325 - -
Pvu2g2794 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
Pvu2g2794 335 MobiDBLite consensus disorder prediction 214 240 - -
Pvu2g2794 335 MobiDBLite consensus disorder prediction 214 235 - -
Pvu2g2794 335 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pvu2g2794 335 PANTHER PLANT NAC DOMAIN PROTEIN 233 325 - -
Pvu2g2794 335 PANTHER PLANT NAC DOMAIN PROTEIN 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2794 Pvu-Chr2 43689095 43692582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2794 1 328 NAC Transcription Factor Family AT5G09330 41.828 1.89e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g2794 NAM 6.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2794 - - vra:106770001 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2794 2 43689095 43692582 Pvu9g1550 9 21883166 21887652 PCT