Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2777 ATGAGTTTGGAGGGGACAGAAAGTTCAGAAGAGGGTGCATGTTATCTGGAGCCTCCTGATCCTGACTTTGTTGAAATTGATCCTACTTGCACCTACATCAAGTACAAAGAAGTGATCGGCAGAGGAGCTTTTAAAACTGTTTACAAGGCATTTGATGAAGTCAATGGGATTGAAGTTGCGTGGAGTCAGATTCAGATTGATGAGGTGTTACAGTCCCCCGGTAACTTAGATAGGCTGTATTCAGAATTGCACCTCTTGCGATCACTGAAGCACAATAACATAGTAAGATTCTATAATTCCTGGATTGATGACAGGCGCAAGACCGTTAATATGATTACGGAATTGTTTACCTCGGGTAGCCTCAAACAGTTTCGTAAAAAACATAAGAAGGTTGACTTGAAGGCCGTTAAAGGATGGGCAAGACAAATTTTATTGGGTCTAAACTATCTCCACGGTCACAACCCACCAGTTATTCACAGGGATCTGAAATGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGAGATCTTGGGCTAGCAACTTTCTTGGATCGAAGTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTTATGGCACCCGAGCTGTATGATGAAAGTTACAATGAATTAGCTGACATATATTCGTTTGGCATGTGCATGCTTGAGTTGGTGACGTCTGAGTATCCTTACAGTGAATGCAGAAACTCGGCCCAGATATACAAGAAAGTTTCATCCGGTATAAAACCTTTTGCTCTTTCTAAAGTGACAGATCCAGAAATGAAATCATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGATTGTCAGCCAAGGAGCTTCTGATGGACCCGTTTCTTCAAATGAATGCTTCAACAAAGAAGGGTCCTTTTCCATTACCACATATTGTTCTTCCCAAATTGGGAGCCTCTGAAAGTCGTTGTATGGTGTCAGAAGGTCCTTCTAGTTCACGTAATGGAGACATTTCAATGGATCTTGGTGACATCTGTGAGCTTCCAGCGATCACTATATTTGATAAATCCCCTGATGATGCATTATGTTCTACAAGTGTTGAGATAAGGAGGCAGAAGAGAGGTGATATTTTCTTCCTAAAAGGTGAAGAAAATGATAAGAACTCTGTATCATTGGTTCTGCGGATAGCTGATCAAGGTGGACGAGCAAGAAATATCCATTTCATTTTCTACCTTGACAGTGACACTGCTGTTTCAGTTTCAAGCGAAATGGTTGAGCAACTTGAACTTACTGATCATAATGTTAAATTCATAGCTGAGTTAATAGATTTGTTATTGATGAATTTGGTTGTTAACTGGAAACCCTGTGTAGCAATTGATCACCTGGTTTCTCCTAGTAATAAACAAACTCTTATGAGCCAACAGGGGGAATTGAAGTTGGCAAAATGCACAGGCAGCTCAAAAGATTCGACTGAAGATTTAGGTCCCTCTACCTCATCTGCAACATTAGTTGCAAGAGAAAACCTTGATAATATGGATATCGATGGGGCTTTATCTGACCTGGGCACTGGTCTTCAGAAAGCAACCAAGGCAGATGATCTATGCTCTGAGAAGTCGTATGCATCTGCAACAACTGATTTCAATGATAATAGATTTTCTGCAGTTTCCTTTATGTCTGCTGAATCAGAATTTGATGGAGGGAGTCAATCCTCAACTGCATCTGAAATTGGGGCATCGTCCGATTGTAAGAGCAAGTTTTTGGACATGGAAGGCTTCTCTAATAGTCTCAACATTGTTTCCTCCTCGTCTGAACCTGAGGGTGAGTTGAAATTAGAGTTGGAAATAATTGAACAGAAGTATCAAGAGGCAATAAATGATTTATCCCAAAAAAGATACCAGGCCATCTTGGAGATTAGAAGGAGAATGTCAGAAAAGATGGTATCATAG 1929 0.4028 MSLEGTESSEEGACYLEPPDPDFVEIDPTCTYIKYKEVIGRGAFKTVYKAFDEVNGIEVAWSQIQIDEVLQSPGNLDRLYSELHLLRSLKHNNIVRFYNSWIDDRRKTVNMITELFTSGSLKQFRKKHKKVDLKAVKGWARQILLGLNYLHGHNPPVIHRDLKCDNIFINGHQGEVKIGDLGLATFLDRSNAKSVIGTPEFMAPELYDESYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPFALSKVTDPEMKSFIEKCLVPASQRLSAKELLMDPFLQMNASTKKGPFPLPHIVLPKLGASESRCMVSEGPSSSRNGDISMDLGDICELPAITIFDKSPDDALCSTSVEIRRQKRGDIFFLKGEENDKNSVSLVLRIADQGGRARNIHFIFYLDSDTAVSVSSEMVEQLELTDHNVKFIAELIDLLLMNLVVNWKPCVAIDHLVSPSNKQTLMSQQGELKLAKCTGSSKDSTEDLGPSTSSATLVARENLDNMDIDGALSDLGTGLQKATKADDLCSEKSYASATTDFNDNRFSAVSFMSAESEFDGGSQSSTASEIGASSDCKSKFLDMEGFSNSLNIVSSSSEPEGELKLELEIIEQKYQEAINDLSQKRYQAILEIRRRMSEKMVS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2777 642 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 641 - -
Pvu2g2777 642 Gene3D - 382 467 - -
Pvu2g2777 642 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pvu2g2777 642 Gene3D Transferase(Phosphotransferase) domain 1 116 298 - -
Pvu2g2777 642 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2777 642 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 641 - -
Pvu2g2777 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pvu2g2777 642 Coils Coil 600 627 - -
Pvu2g2777 642 SUPERFAMILY Protein kinase-like (PK-like) 35 325 IPR011009 -
Pvu2g2777 642 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2777 642 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2777 642 CDD STKc_WNK 32 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2777 Pvu-Chr2 43479014 43482762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2777 133 464 MAP Kinase Kinase Kinase AT1G49160 66.867 1.21e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu2g2777 Pkinase 5.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2777 K08867 - gmx:121175054 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2777 2 43479014 43482762 Pvu2g2777 2 43479014 43482762 ECH
Pvu2g2777 2 43479014 43482762 Pvu9g1529 9 21645370 21649098 PCT