Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2775 ATGGATTATGAGCAATTTGATTTCTCATTTGGCCCTCCTTACATGAACCAACTCCACGAGTGTTGCTTAGAAAATGCATTCCCATTCCAAACAGAAGATATATCATCACCAAATACCATCCTGGATGAAATGTTTGGTGAAGAGTCTTTGGAGTTGCTTCTGCAACACACAAACAACCAGGACTTTGGTTTTATGAATCATAATGATCCACTAGAGATTGAATTCTGTGATGGATTTGCCCTTAGTTCTGAGGAAAATGTGCATGTTGCAATGGAAGAAGGGGATTCTTATTTGAAGGGAATCCAAGCAGAGCTAGTGGAACCGACTAGTTTAGCTGATCTTCTGTTAACAGGAGCTGAAGCTGTTGAAGCACACAACTGGGCTCTTGCTTCAGACATAATTGAGAAACTTAATAAGGCATCTTCTTTAGAAACCGGTGATGGTTTGTTGAACAGGTTGGCTCTTTTCTTTACTCAGGGTCTGTATTATAAAAGTACAAATGCCCCTGAACTGTTGCAGCGTGGTGCTGTTTCTACACACACAAATGCTTTCTGTGTGTTTCAGATTCTCCAAGAACTCTCACCCTATGTGAAATTTGCTCATTTCACCGCCAACCAAGCAATCTTAGAAGCCACGGAAGGTGCTGAGAATGTTCACATCATTGATTTTGACATCATGGAGGGAATCCAGTGGCCACCCTTGATGGTTGACCTTGCAATGAGGAAAAGTACTACTTCCCTTAGAGTATCAGCCATCACAGTGGACCAGAGAGGTGCTGCTTCTGCTCAACAAACAGGAAGAAGGCTCAAAGAGTTTGCAGCTTCTATCAACTTTCCATTTGTGTTTGATCAAATCATGATGGAAAGAGAAGAAGATATTCAAGGAATTGAACTTGATCAAACACTCATAGTCAACTGTATGATACACCAGTGGATGCCCAATAGGAGCTTCTCACTGGTCAAAACCTTTTTGGATGGTGTAACCAAATTGTCCCCAAGGCTTGTGGTTTTAGTGGAGGAAGAACTATTTAATTTTTCTAGGCTCAAATCCATGTCCTTTGTTGAGTTCTTCTGTGAGGCTTTACATCACTACACTGCACTTTGTGATTCACTTGCTAGTAGTCTATGGGGTAGCCACAAGATGGAGATGACCCTGATAGAGAAAGAGATTTTGGGGCTTAGAATCTTGGACAGTGTGAGGGAGTTTCCTTGTGAGAGAGAGGAGAGAAAGGTTTGGGAGGAAGGGTTTTATTCCTTGAAAGGGTTTAGATGTGTTCCTATGAGTACATGTAATATTTCACAAGCCAAGTTCTTGGTAAGCCTCTTTGGTGGAGGGTATTGGGTCCAATTCGAGAAGGGTAGGTTGGCCTTGTGTTGGAAGTCAAGGCCTTTGACTGTGGCTTCAATCTGGGTACCAAAGGGTTATTCGAGTGACAAAGTCAAATAG 1446 0.4212 MDYEQFDFSFGPPYMNQLHECCLENAFPFQTEDISSPNTILDEMFGEESLELLLQHTNNQDFGFMNHNDPLEIEFCDGFALSSEENVHVAMEEGDSYLKGIQAELVEPTSLADLLLTGAEAVEAHNWALASDIIEKLNKASSLETGDGLLNRLALFFTQGLYYKSTNAPELLQRGAVSTHTNAFCVFQILQELSPYVKFAHFTANQAILEATEGAENVHIIDFDIMEGIQWPPLMVDLAMRKSTTSLRVSAITVDQRGAASAQQTGRRLKEFAASINFPFVFDQIMMEREEDIQGIELDQTLIVNCMIHQWMPNRSFSLVKTFLDGVTKLSPRLVVLVEEELFNFSRLKSMSFVEFFCEALHHYTALCDSLASSLWGSHKMEMTLIEKEILGLRILDSVREFPCEREERKVWEEGFYSLKGFRCVPMSTCNISQAKFLVSLFGGGYWVQFEKGRLALCWKSRPLTVASIWVPKGYSSDKVK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2775 481 ProSiteProfiles GRAS family profile. 102 471 IPR005202 -
Pvu2g2775 481 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 472 IPR005202 -
Pvu2g2775 481 Pfam GRAS domain family 112 470 IPR005202 -
Pvu2g2775 481 PANTHER OS12G0162700 PROTEIN 3 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2775 Pvu-Chr2 43474257 43475848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2775 111 470 GRAS Transcription Factor Family AT5G41920 33.333 5.44e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu2g2775 GRAS 2e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2775 - - gmx:100804613 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2775 2 43474257 43475848 Pvu2g2775 2 43474257 43475848 ECH