Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2764 ATGGATTCTAAGGATTTTCGATCCATATTGGAGAGCGCGGGCATCGACATTTGGATGTTGATGGATGTCGCCATCGCAGTGGCGTCTGTCGACCACAGTGATGAATTGAGGCGTCGAAGAGACGGAATCGTGGAGCGCCTCTATGCCACGAGCTCCGTGTCATCTCCGCCGTGTCCAAATTGTGATGTCGACGACGTTAGAGAAATCGAGATGAAAAGCAATGTTAATCCCTCCGTGGAGGAGGAAAAGGAAACTTGCGAAGTCTTGTTTGATGATGAACAAAAGAAGATTCTAGAGATTAAAGAGCAACTTGAAGATCCTCACCAGTCCATAGATTCGTTGTTGGAGCTGTTGCAGAATCTAGCAGACATGGATATCACATTCCAAGCCTTGGAAGAGACTGACATTGGGAGGCATGTGAATCGGTTGAGAAAGCATTCGTCTAATGACGTTAAGAAATTGGTGAAGTTGCTCGTCAGGAAATGGAAGGAGATTATAGATGAATGGATGAAGTTGAAGACGCCAGGAGAAGCGACTACTACTGTCGTGGCTGACGAGGACTCGCCACAAGAGAAAATCCTGCAAAATGGGCATCGTCAGATTCCCGATTTTGCAGACTCGCCAAATGCACTCAATGAGAGTTTTGGGTCAGAGCACAACAACATTGAACCACAACAACGAAAACCAAAAGCAATTCCTCGCAAAGAATCTCCCCCACAACCATCGGCATCAAGACAAAGAGAGAGCAATTTTGAGTTGGATAAACTTGCTTCAGCAAGAAAGCGACTTATAGAGAACTACAAAGAGGTTGCAAATGCCAAAAAGCAAAGAACGATCCAGGTGATGGATCTCCATGAGCTGCCAAAACCCAAGAATGCCTTCTTCGGAAAAAACAAAGGTGGCACCAGTCAGAGAAAACACTGGTGA 927 0.4574 MDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPNCDVDDVREIEMKSNVNPSVEEEKETCEVLFDDEQKKILEIKEQLEDPHQSIDSLLELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPGEATTTVVADEDSPQEKILQNGHRQIPDFADSPNALNESFGSEHNNIEPQQRKPKAIPRKESPPQPSASRQRESNFELDKLASARKRLIENYKEVANAKKQRTIQVMDLHELPKPKNAFFGKNKGGTSQRKHW* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2764 308 CDD TFIIS_I 94 167 - -
Pvu2g2764 308 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 94 175 IPR035441 -
Pvu2g2764 308 MobiDBLite consensus disorder prediction 200 251 - -
Pvu2g2764 308 Pfam TFIIS helical bundle-like domain 117 166 IPR017923 -
Pvu2g2764 308 ProSiteProfiles TFIIS N-terminal domain profile. 92 169 IPR017923 -
Pvu2g2764 308 Coils Coil 253 273 - -
Pvu2g2764 308 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 308 IPR044790 -
Pvu2g2764 308 SMART TFS2_5 97 168 IPR003617 GO:0005634
Pvu2g2764 308 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 90 179 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2764 Pvu-Chr2 43384681 43386969 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pvu2g2764 Med26 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2764 - - gmx:100796457 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2764 2 43384681 43386969 Pvu2g2764 2 43384681 43386969 ECH
Pvu9g1517 9 21492168 21495174 Pvu2g2764 2 43384681 43386969 ECH
Pvu2g2764 2 43384681 43386969 Pvu9g1517 9 21492168 21495174 PCT