Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2755 ATGGCGAATCCCAGAGAACAGGGTAGCGAGGGTGATCGGAGTGAAGCGAGAGACTGTCATTCGTTGTCAATGGCAACGATGCTTTCAGGGTTGAATAGGGAGAGGGAGATGTCAGCCATGATCTCTGCTTTGACTCAAGTTGTTCGTGGAGAGGATCAGAGTGACGATCATTCGGTTCTTGGTGGTGGCTCTGCATGTTCATCTTATTATGGAAACTCTGTTCTGAAGAGAAGGAGGGAAGGTGACAATACAAGTGATCTCCCACGTGGAACTTCATTCCCTGCTGTTTCAACATATGGAGATGGTGAAAGTTCAAGCAGGGTGACAAGAAGGGAAACGAGAGAAATGGAGAATAGGGAGTACGATTACGAGTACAGCAGGGGAGAGAGGGAGAGAGTGGAAGAGGAACCAAAGAGGAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCTGCGGAAATAAGGGATCCATTCAAGGCTGCTAGAGTCTGGTTAGGAACATTTCAGACAGCTGAGGATGCGGCCAGAGCCTACGATGAAGCTTCCTTACGTTTCAGAGGCAACAAAGCCAAACTCAACTTCCCTGAAAATGTGAGGCTGAGAAACCAATCACAGCCACCACCAACCACCCATTTCTCCATTCCGTCTACAACTGAACCCATTGGTCACACTCAGTCTCAGGCTCAGGGTTCACATGATTCCGGCTACTTCTACGATTATTCGCGTGTTCATGAGTTTCCCGTGAGCCTCTATGAGCAGGTTGCCATGTCATCATCATTCTCTGTGGCGGCTTCTCATCTTCAATCTTCACCATCCTATTCTTCTTCCTCAACTATCACTTCTCCCCAACCACCTCCTCTTCTTCCTTCCCCTTATGCTACGCAACTACTCCCATGCTCTTCTTCTTCTGCTGCTGCTTACACAAACACCTCGCATCCTTCCTCCAAATAG 957 0.488 MANPREQGSEGDRSEARDCHSLSMATMLSGLNREREMSAMISALTQVVRGEDQSDDHSVLGGGSACSSYYGNSVLKRRREGDNTSDLPRGTSFPAVSTYGDGESSSRVTRRETREMENREYDYEYSRGERERVEEEPKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFQTAEDAARAYDEASLRFRGNKAKLNFPENVRLRNQSQPPPTTHFSIPSTTEPIGHTQSQAQGSHDSGYFYDYSRVHEFPVSLYEQVAMSSSFSVAASHLQSSPSYSSSSTITSPQPPPLLPSPYATQLLPCSSSSAAAYTNTSHPSSK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2755 318 PANTHER DNA-BINDING DOMAIN 48 305 IPR044808 GO:0003700|GO:0009873
Pvu2g2755 318 MobiDBLite consensus disorder prediction 198 232 - -
Pvu2g2755 318 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 SMART rav1_2 140 203 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 MobiDBLite consensus disorder prediction 86 104 - -
Pvu2g2755 318 MobiDBLite consensus disorder prediction 273 296 - -
Pvu2g2755 318 PANTHER DNA-BINDING DOMAIN PROTEIN 48 305 - -
Pvu2g2755 318 SUPERFAMILY DNA-binding domain 140 198 IPR016177 GO:0003677
Pvu2g2755 318 ProSiteProfiles AP2/ERF domain profile. 140 197 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 MobiDBLite consensus disorder prediction 1 31 - -
Pvu2g2755 318 MobiDBLite consensus disorder prediction 199 232 - -
Pvu2g2755 318 PRINTS Ethylene responsive element binding protein signature 141 152 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 PRINTS Ethylene responsive element binding protein signature 163 179 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 Gene3D AP2/ERF domain 139 199 IPR036955 GO:0003700|GO:0006355
Pvu2g2755 318 Pfam AP2 domain 140 189 IPR001471 GO:0003700|GO:0006355
Pvu2g2755 318 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2755 Pvu-Chr2 43308758 43309976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2755 27 202 AP2-EREBP Transcription Factor Family AT5G64750 50.000 3.02e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g2755 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2755 - - var:108344045 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2755 2 43308758 43309976 Pvu2g2755 2 43308758 43309976 ECH
Pvu2g2755 2 43308758 43309976 Pvu9g1426 9 20264478 20266250 ECH