Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2750 ATGGGATGCCTTAACTCCAAATATTCTCCTCATAGGAACGCTGAGAGAAGATTGAAAGGAGAGAAAGAAGATGCAACAAAATCATTGACGCAGAACCACAACAAGGACCATTCATATAACAGGTTCAAAGAAAAGATAGAAAGAGTAGTATCCAATGAAAAAGAAAGGGATAATAGTAATAGTGAGATAAAGGGTGTTGCTAGAAACGATAACAAGAGTGATGAGGTTGGTGAGAATGTTCCTCAGAGATCTCAGGAAAAGAAGATTATTGTTGCAAACTCTGAGTTTGTGGAGGGTTGGCCAAAATGGCTAGTTGATAATATCCCACCAAACGTGTTGGATAGCTTGGTTCCCAAGAGTGCTGATTCCTATGAAAAACTTGGAAAGGTGGGGCATGGAACATATAGCAATGTATACAAAGCCCGAGATAAGGAGAGTGGAAAGATTGTGGCTTTGAAGAAGGTAAGGTTTGACACATCAGATCCTGAAAGCATAAAGTTTATGGCGAGAGAGATAATGATACTGCAGAAGCTGGATCATCCCAATGTCATCAAACTACAAGGACTTGCAACATCACGGATGCAGTATAGTCTTTATCTTGTTTTTGATTACATGCATTCTGACCTTACAACAATTATCTCTCGCCCTAGGGACAAACTCACTCAACCAAAGATCAAGTGTTATATGCAGCAACTGCTTCTGGGGCTCCAGCATTGTCATGAGAGAGGAGTTATGCATAGAGATATTAAACCTTCCAACTTGTTAGTAGACAAAAAAGGGGTGCTGAAAATTGCAGATTTCGGGCTAGCAAATTCTTTTGCTATCAAACCTGAAGGGCCTTTCACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACAGATTATGGGTATGAAATTGATCTCTGGAGTGCAGGATGCTTATTGGCTGAGATGTTCCTTGGAAGGCCACTTATGCCTGGAAGAACAGAGGTTGAACAACTTCACATGATCTTCAAACTTTGTGGTTCACCTTCTGCGGATTATTGGATGAGAATGAAGCTAGTGACAAGCTTATTTCCACCACTTCATTACAAAGCTAATTATGATGAAAACTTTAAGGATTTTCCTCCCTCTGCTTCTGCTCTCTTGACTACACTTCTTCATCTAGATTCTCATGAACGTGCCACAGCTGCTTCTGCACTTCAAAGCCAATTTTTCAAGTCAAGTCCATTAGCATGCGACGTTTCAGCTTTAGCAGTAACATACAAAGATGAAGATGAATACTCACAAACAAAAAGACGCAAACGGCGAAAGGGTCTGAAAAACAAAGGGCATTTATTTCAAACAAGTACATGCAATATGAACCAATCAGGAAAGAACAATGTTTCTGAACAAAGCAGGAGAGATTCAGAATCATCCAAAGAGAAGAGTGTGGCAGAAGACATGGAAGGTGAAGAAATTGGAAAAAGTGAAAGCAAGAGAAGGCCAGTTTTTATGAGCATGAATGAATGTATATCCCCAGTTTTTGTGTCTGGTGTGAGAAAATCCCCTAGAACAGAGGGCCATCCGAATGCTCTTAAGAACATAAAAAACTATGCCCTCTTACAAGCCTCAATAATTGATATGATCAATCGCAATGAAGGAAATGAAATTGGTCCATTGCGAAAGTCCTTTTCTGCCTTGGATTTTGGCATCTACGCCCAGTTAAGAAATTGA 1716 0.4003 MGCLNSKYSPHRNAERRLKGEKEDATKSLTQNHNKDHSYNRFKEKIERVVSNEKERDNSNSEIKGVARNDNKSDEVGENVPQRSQEKKIIVANSEFVEGWPKWLVDNIPPNVLDSLVPKSADSYEKLGKVGHGTYSNVYKARDKESGKIVALKKVRFDTSDPESIKFMAREIMILQKLDHPNVIKLQGLATSRMQYSLYLVFDYMHSDLTTIISRPRDKLTQPKIKCYMQQLLLGLQHCHERGVMHRDIKPSNLLVDKKGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMFLGRPLMPGRTEVEQLHMIFKLCGSPSADYWMRMKLVTSLFPPLHYKANYDENFKDFPPSASALLTTLLHLDSHERATAASALQSQFFKSSPLACDVSALAVTYKDEDEYSQTKRRKRRKGLKNKGHLFQTSTCNMNQSGKNNVSEQSRRDSESSKEKSVAEDMEGEEIGKSESKRRPVFMSMNECISPVFVSGVRKSPRTEGHPNALKNIKNYALLQASIIDMINRNEGNEIGPLRKSFSALDFGIYAQLRN* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2750 571 ProSiteProfiles Protein kinase domain profile. 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2750 571 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Pvu2g2750 571 MobiDBLite consensus disorder prediction 464 493 - -
Pvu2g2750 571 MobiDBLite consensus disorder prediction 10 82 - -
Pvu2g2750 571 MobiDBLite consensus disorder prediction 426 493 - -
Pvu2g2750 571 CDD STKc_CDK9_like 124 406 - -
Pvu2g2750 571 Gene3D Phosphorylase Kinase; domain 1 113 206 - -
Pvu2g2750 571 Gene3D Transferase(Phosphotransferase) domain 1 207 445 - -
Pvu2g2750 571 Pfam Protein kinase domain 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2750 571 SUPERFAMILY Protein kinase-like (PK-like) 119 411 IPR011009 -
Pvu2g2750 571 MobiDBLite consensus disorder prediction 1 84 - -
Pvu2g2750 571 SMART serkin_6 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2750 571 PANTHER CYCLIN-DEPENDENT KINASE 75 487 - -
Pvu2g2750 571 PANTHER CELL DIVISION PROTEIN KINASE 75 487 - -
Pvu2g2750 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Pvu2g2750 571 MobiDBLite consensus disorder prediction 444 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2750 Pvu-Chr2 43274549 43277953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2750 109 438 Core Cell Cycle Gene Families AT5G10270 44.253 3.18e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu2g2750 Pkinase 5.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2750 K08819 - gmx:102667260 805.438