Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2741 ATGTCAACAACTTCCCACACCATTGCTCACCACAGCTTATTTGAGGAGCAGGATCAGATTCCCACACAGATGGGGTTCTTTCCCTTTCCAACAAACCTCACCTTGCCTCCTTTGGGTTGCCACCAATCCTCTTTGAAAGCCTTCAGCTCCATAACACCTTCTTCACTTGCTATATCTCAACAAGATTCTACATCAAATCTAACAGAAACCCTATTTCAGAAGTCTAGAGAAGACCTCACTTCTGGCTTTGGAGGAGCTCAATTCCTCTCCTTGCATAGATCCAGTGTAAATCCATGGGCATTGGGAGAAGTGACTGATTGCTTCAGCAGTAAAAGAAGTGGATTTGATGATCATCATCTGGGAATTTCAGCCATGAAGATGAAGAAAATGAAGGCAAGAAGGAAGGTTAGAGAGCCTAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGAAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGAAGCTATTACCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGTGTGGAACGGTTGGCGGAGGATCCGAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCGAATGATCTGGAAGATTCTTCATCAGCATCTCAACTTGGCAACTTCTTATGGTAG 690 0.4449 MSTTSHTIAHHSLFEEQDQIPTQMGFFPFPTNLTLPPLGCHQSSLKAFSSITPSSLAISQQDSTSNLTETLFQKSREDLTSGFGGAQFLSLHRSSVNPWALGEVTDCFSSKRSGFDDHHLGISAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSSSASQLGNFLW* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2741 229 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2741 229 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 42 220 - -
Pvu2g2741 229 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2741 229 MobiDBLite consensus disorder prediction 214 229 - -
Pvu2g2741 229 Gene3D WRKY domain 139 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2741 229 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2741 229 MobiDBLite consensus disorder prediction 208 229 - -
Pvu2g2741 229 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 220 IPR044810 GO:0003700
Pvu2g2741 229 SUPERFAMILY WRKY DNA-binding domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2741 Pvu-Chr2 43213877 43215924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2741 122 229 WRKY Transcription Factor Family AT4G39410 77.876 2.84e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2741 WRKY 9.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2741 - - pvu:PHAVU_002G266400g 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2741 2 43213877 43215924 Pvu2g2741 2 43213877 43215924 ECH