Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2729 ATGGATTTCTTCTACTTTGGAAACCCTCACCCTTCTCATGATCATCTTCACAACATGCCACCATCTTCCCCTGAGATCGCACTCTCTGATTACCTCCTTCTCGATGATTTCCTTGATCATCATCATGGACACTCTCCATCATCACAAAGCACTGAATCATCGGAAAAAACCACTTTCACTGATGCCACTCATGGATTCACCACTGGTGCAACCTCTAAGAACAACAACAACAACATAAAGTGCAAGAACGAGATCAGTGAAAGCAAAGCAAGGTTGGGTCCAAGAATCGCGTTTAGAACTAAATCTGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAATCCCAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATGAGAGCCCTTTTACCACATACTACAGCCCCATCTCCTTCTTACATTCTGATGATTCTACAAGTTCTAAATGA 564 0.4273 MDFFYFGNPHPSHDHLHNMPPSSPEIALSDYLLLDDFLDHHHGHSPSSQSTESSEKTTFTDATHGFTTGATSKNNNNNIKCKNEISESKARLGPRIAFRTKSELEIMDDGYKWRKYGKKSVKSNPNLRNYYKCSSGGCSVKKRVERDREDSSYVITTYEGVHNHESPFTTYYSPISFLHSDDSTSSK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2729 187 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2729 187 Gene3D WRKY domain 94 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2729 187 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2729 187 MobiDBLite consensus disorder prediction 42 79 - -
Pvu2g2729 187 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 18 172 - -
Pvu2g2729 187 SUPERFAMILY WRKY DNA-binding domain 99 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2729 187 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 172 IPR044810 GO:0003700
Pvu2g2729 187 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2729 187 MobiDBLite consensus disorder prediction 47 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2729 Pvu-Chr2 43085670 43087004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2729 58 182 WRKY Transcription Factor Family AT5G64810 56.349 1.75e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2729 WRKY 3.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2729 - - gmx:100500248 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2729 2 43085670 43087004 Pvu2g2729 2 43085670 43087004 ECH