Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2725 ATGGCGCCGAAGCAGATAACGCGTAAGGTTAGCAGAAACCCTGAATTGATAAGGGGCATTGGAAAGTACTCGAGATCACAAATGTACCACAAGAGGGGTATTTGGGCTATCAAGGCTAAAAACGGCGGCGTTTTCCCTCGCCACGATCCTACTCCCAAACCTGAAACTCCCGCTCAAAAACCTCCCAAATTTTACCCTGCTGATGATGTCAAGAAACCCCTTCTCAACAAGCACAAACCCAAAATCACCAAGCTCAGGGCTAGCGTTACCCCTGGGACAGTGTTGATTCTTCTTGCCGGTAGATTTAAGGGAAAGAGGGTAGTGTTTTTGAAGCAGCTTCCTTCCGGGTTGCTTCTTGTAACTGGTCCTTTCAAGATCAACGGAGTTCCATTGAGGCGTGTCAACCAGTCATATGTTATTGCCACATCAACCAAAGTAGATGTTTCTGCTGTTAATGTGGACAAATTTGATGACAAATACTTTTCAAAGGAGTCCCAACAAAAGAAGAAGAAGGGAGAGGGCGAGTTTTTTGAGGCAGAGAAGGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACTGTGGACTCTGCATTGGTAAAGGCAATCGAGAGTGTTCCGGACTTGAAATCTTATCTGGGTGCTAGGTTTTCCCTAAAGGCTGGTGTGAAACCTCACGAGCTGGTCTTTTAG 702 0.4615 MAPKQITRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPTPKPETPAQKPPKFYPADDVKKPLLNKHKPKITKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDVSAVNVDKFDDKYFSKESQQKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDSALVKAIESVPDLKSYLGARFSLKAGVKPHELVF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2725 233 MobiDBLite consensus disorder prediction 45 68 - -
Pvu2g2725 233 CDD KOW_RPL6 81 233 IPR041997 -
Pvu2g2725 233 ProSitePatterns Ribosomal protein L6e signature. 127 145 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pvu2g2725 233 Pfam Ribosomal protein L6, N-terminal domain 4 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pvu2g2725 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pvu2g2725 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 - -
Pvu2g2725 233 SUPERFAMILY Translation proteins SH3-like domain 87 173 IPR008991 -
Pvu2g2725 233 Gene3D - 87 171 IPR014722 -
Pvu2g2725 233 MobiDBLite consensus disorder prediction 172 196 - -
Pvu2g2725 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2725 Pvu-Chr2 43066509 43068111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2725 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 78.541 2.42e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2725 K02934 - gmx:100785356 404.831