Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2701 ATGGCCACCACACTCGCTTGGCGACACGCTGCCAACAATGCAAATGATCTGGAAAGAAATGGTGATAGGAATACTCAAGATTCAGAGCCCCCAACACCACATTCTGTTCTGAAGATGGGATTTAGAGAGCGGAACAGCAGCATGGAGGATCCAGATGGAACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCTTATTCTGTGCAGGAGAAAGAATATTCCTTAAGGCAGCTATTGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTTAGGTCTGGTTCATTGAATGTGAAGATACAGGCAGCGACCGTCTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGGGTCAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTAGTCTATTAAAGTCCAGTTCTACTGAAGGACAAATTGCTGCTGCAAATACTATTTATGCTGTCTCTCAGGGTGGTGTAAAGGATCATGTTGGTTCAAAAATATTTTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAATACTGAGGGATTCTGGAATGCAACTATACGAGCTGGAGGAGTCGACATATTAGTGAAGTTACTGGCAAAAGGACAGCCCAGTAGTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCGGAGGTGACAAAACAACTTCTGAAACTATTAGGCCCTGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAGGCAAGGCGAGAGATAGCCAATGCTAATGGTATTCCTTCTCTGATCAATGCTACCATAGCTCCTTCCAAAGAATTCATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGAGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTACGTCATATCTAGCCTTGGTCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGAGCTTTGGCATCAGCTCTCATGATATATGATAACAAGGCAGAATCAACCAGAGCATCAGATCCTTTGGTTGTCGAGCAGACATTACTCAAACAATTTGAGCCTCGCTTGCCCTTCCTTGTAAAGGAACGAACCATTGAAGCGCTTGCTAGTTTGTATGGAAATTCCGTACTTTCAAATAAACTTGCAAATGCCGATGCAAAACATCTGCTAGTTGGTTTGATAACAATGGCTGTAAATGAAGTGCAAGACGAACTTATAAAAGCTCTGTTGACAGTGTGCAAAAGTGAAGGCAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATTTGAAAATGATGAAAGTAAATGGGCAATTACTGCAGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCAGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAAGAACCTGTGCAATCATAGCGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAAGATATTGCTGCAAAGACTTTAAATCATTTAATTCATAAATCAGATACTACAACCATTAGTCAGCTTACAGCTTTATTGACTAGTGATCTTCCTGATTCTAAGGTTTATGTTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGCGACATTTTACGTGAAGGTAGTGCTGCCAGCGATGCATTTGATACTATGATAATATTATTGAGCTCTGCCAGAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTCAAAACTCTTTTGTCAGCCAAGAAATTGCTCAATGCTGAATCTGAAAGTATCCTGATTGAGTCCTCCCACTGCATGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTATCGCTAGAGATACATTATCCCCTCTAGTTTCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCACATGTGCTCTGGCGAACCTTATTTTAGATGGTGAAATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTACCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACTCATGCCGCAGCAGCAATTGCTCGCCTCCTACATTCTCGGGATGTTGATTATGCTGTAACTGATTGTGTGAATCGTGCTGGAACTGTTCTTGCATTAGTCTCTTTCTTAGATTCTGCTGTTAATGGATCTGTTGCTACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCGGTAGAGACCAGTGCAAATATTAAATCTGCTTGTGCTGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCTTGTGTATTGTTGATTCGGAGCCAATGTTGCAGGATAAAACTATTGAGATTTTATCTCGATTATGTAAGGATCAGCCTGTTGTTTTGGGAGATACTATTGTGTCAGCACCTGGATGCATATCTTCAATAGCTAAAAGAATAATTAGTTCCACAAATGTGAAGGTCAAAATTGGCGGAGCAGCACTTCTTATTTGTACTTCTAAAGCAAATCATCAGAGACTGGTGGAGGATCTGAGTTCGTCGAACTTGTGTGTTGATCTTATTCGATCTCTTGTTGATATTCTTGTTTCTGCACTGCCTTCTTCGGGTTACCTGGATGATGACAACAAGGAACTCATTAGCATATGCAGGCACACAACAGAAGAGGCCAACAGTTCTGAATCCAACACTAGCACTAGCATTATCTGTGGTGTTGACTTGGCGCTATGGCTATTGTCTATTCTTGCTTGTAATGATGAAAAAAATAAAATTGCAATAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCGCAATATTCTCAGATGGACTACAAAGAAGATAGAATCATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATTCGGGCCCATCCAACTATGAAATCTATACCTGCACTTACCAGTTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTCCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTCTGGTGCGTTATCCTGATCAAGTGGCTCTTGAGAGGTTGTTTCGAGTTGAAGACATAAGAGTTGGAGCTACTTCTCGGAAGTCTATACCTGCCTTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCTGGGGCACCATTTTTGGCACTTGTACTTTTGACTCAGCTCAGTAAAGATTGTCCTTCAAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTCAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGCTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAGACATGAATCAGCATTTGGTGCTGTTGCTCAACTTGTAGCTGTGCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTTTCTGCTGATCACATCAGAAATGCAGAGATTGCTCGGCAGGCTGTTCAACCATTGGTGGAGATTCTCAGTACTGGTTCAGAAAAGGAGCAGCATGCTGCAATTGCTGCATTAGTGGGGTTGCTGAGTGAAAATCCATCAAGAGCTCTTGCTGTTGCAGATGTTGAGAAAAATGCAGTGGAAGTTCTTTGTAGGATCCTTTCATCAAATTCTTCAATGGACCTGAAAGGGGATGCTGCTGAATTATGTTGTGCTCTCTTTGGAAATACAAGGATTCGGTCCACAGCAGCTGCTGCAAGTTGTGTTGAACCTCTTGTCTCTCTCCTGGTATCTGAGTTCAGTCCAGCTCATATTTCAGTTGTCCGGGCACTGGATAGGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTAGTTGGCCTACTGTCTGGTACGAATTATATACTACATGAGGCCATTTCCAGAGCTCTAGTCAAGTTGGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCTACTTTTGCAGAATTGTTGCGTATATTGACTAATAATACTAGCATAGCTAAAGGTACATCTGCTGCTAAAGTGGTTGAACCATTGTTTTTGTTACTGACAAGGCAGGAATTTGGGCCAGATGGACAGCACAGTGCATTGCAGGTGTTGGTTAATATCTTAGAACATCCAAAGTGTCGTGCTGACCATTCATTAACTTCTCGTCAAGTTATTGAACCACTTATCCCTTTGCTTGATTCTCCAATTTCAGCAGTGCAACAATTGGCTGCTGAGCTTCTTTCACATCTACTTCTTGAAGAACGCCTTCAGAAGGATCCCGTGACACAGCAAGCAATTGGCCCTCTCATTCGAGTTCTTGGTTCTGGTATACACATATTGCAACAGAGAGCTGTAAAAGCCCTTGTTAGTATTGCACTAACATGGCCAAACGAAATTGCTAAGGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCTCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTGCCTATTGCTGTATTGGTAAGGTTACTTCGATCTGGCTCAGAGAGCACGGTTGTTGGTGCTTTAAATGCTCTTCTGGTGCTAGAAAATGATGATGGAACTAGTGCAGAAGCTATGTCAGAAAGTGGAGCTATAGAGGCTCTCTTGGAGCTCCTGCGATCTCATCAGTGTGAGGAAACTGCTGCAAGGCTTTTAGAAGTATTGCTGAACAATGTAAAGATTCGAGAAACAAAAGTAACAAAATCAGCTATCGTACCATTATCGCAGTACCTTTTGGACCCACAAACTCAAGCTCAGCAAGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGGTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTAAATGTTCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGATCAAATAGGAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTACTGGATCTGATAGGTTCAAGTAATCCAGAAACATCAGTTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAACACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCCATAACTGCTGCTATTGAAAAAGATTTATGGGCTTCTGGAACTGTGAATGACGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTTAGAGCAACTGAACCAGCGACACTTAGCATTCCCCATCTGGTTACAGCCTTAAAGACAGGTTCAGAAGCTTGTCAGGAAGCAGCATTGGATGCACTTTTCTTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCATTGCTGCAGTACTTGATCCAGTCTGGGCCACCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGAACATTGGTAGTGATCATCAAACGTGGTAACAACATGAAGCAATCTGTTGGAAATCCAAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCCCCAAGGCAAACCCAGGTGGTTTCAACTGGACCTAATCCGGAGTGGGATGAGAGCTTTTCATGGACCTTTGAGAGTCCTCCCAAAGGCCAGAAGCTTCATATCTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGAAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTTGGATCAGTAGCAGGAGAGTACGCTTTGTTGCCTCAAAGTAAAAGTGGGCCGCCACGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTGA 6441 0.4266 MATTLAWRHAANNANDLERNGDRNTQDSEPPTPHSVLKMGFRERNSSMEDPDGTLASVAQCIEQLRQSSYSVQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLSLLKSSSTEGQIAAANTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIRAGGVDILVKLLAKGQPSSLANVCNLLASVMMEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALKSLSAQCKEARREIANANGIPSLINATIAPSKEFMQGECAQALQENAMSALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLKQFEPRLPFLVKERTIEALASLYGNSVLSNKLANADAKHLLVGLITMAVNEVQDELIKALLTVCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSFENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSDILREGSAASDAFDTMIILLSSAREETQAKSASALAGIFETRKDVRESSIAVKTLLSAKKLLNAESESILIESSHCMAAIFLSIKENRDVAAIARDTLSPLVSLANSSVLEVAEMATCALANLILDGEIAEKAIAEEVILPATRILCEGTISGKTHAAAAIARLLHSRDVDYAVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSVETSANIKSACAVLAEFPKSISPIVLCIVDSEPMLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTNVKVKIGGAALLICTSKANHQRLVEDLSSSNLCVDLIRSLVDILVSALPSSGYLDDDNKELISICRHTTEEANSSESNTSTSIICGVDLALWLLSILACNDEKNKIAIMEAGAIDVLIDRISNCFSQYSQMDYKEDRIMWIHALLLAILFQNRDIIRAHPTMKSIPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVEDIRVGATSRKSIPALVDLLKPIPDRPGAPFLALVLLTQLSKDCPSNMSVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRRHESAFGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEKNAVEVLCRILSSNSSMDLKGDAAELCCALFGNTRIRSTAAAASCVEPLVSLLVSEFSPAHISVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGTNYILHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCATFAELLRILTNNTSIAKGTSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPKCRADHSLTSRQVIEPLIPLLDSPISAVQQLAAELLSHLLLEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMSESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK* 2147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2701 2146 SUPERFAMILY ARM repeat 1673 2023 IPR016024 -
Pvu2g2701 2146 Gene3D - 1172 1312 IPR011989 -
Pvu2g2701 2146 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 531 573 IPR000225 GO:0005515
Pvu2g2701 2146 SUPERFAMILY ARM repeat 422 727 IPR016024 -
Pvu2g2701 2146 MobiDBLite consensus disorder prediction 1 37 - -
Pvu2g2701 2146 Gene3D C2 domain 2024 2146 IPR035892 -
Pvu2g2701 2146 Gene3D - 812 1166 IPR011989 -
Pvu2g2701 2146 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 16 2146 - -
Pvu2g2701 2146 SMART C2_3c 2026 2122 IPR000008 -
Pvu2g2701 2146 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 16 2146 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Pvu2g2701 2146 CDD C2 2027 2117 - -
Pvu2g2701 2146 Gene3D - 608 811 IPR011989 -
Pvu2g2701 2146 ProSiteProfiles C2 domain profile. 2006 2123 IPR000008 -
Pvu2g2701 2146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2025 2128 IPR035892 -
Pvu2g2701 2146 Gene3D - 421 607 IPR011989 -
Pvu2g2701 2146 SUPERFAMILY ARM repeat 60 391 IPR016024 -
Pvu2g2701 2146 SUPERFAMILY ARM repeat 656 993 IPR016024 -
Pvu2g2701 2146 Pfam C2 domain 2025 2114 IPR000008 -
Pvu2g2701 2146 SUPERFAMILY ARM repeat 1181 1560 IPR016024 -
Pvu2g2701 2146 Coils Coil 292 319 - -
Pvu2g2701 2146 Pfam Armadillo/beta-catenin-like repeat 99 129 IPR000225 GO:0005515
Pvu2g2701 2146 Pfam Armadillo/beta-catenin-like repeat 520 559 IPR000225 GO:0005515
Pvu2g2701 2146 SUPERFAMILY ARM repeat 1020 1154 IPR016024 -
Pvu2g2701 2146 SMART arm_5 812 854 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1725 1764 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1434 1474 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 477 518 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 306 355 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1307 1347 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1476 1516 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1852 1892 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1224 1265 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1393 1433 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 728 766 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 89 130 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 1564 1602 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 520 560 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 562 602 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 131 171 IPR000225 GO:0005515
Pvu2g2701 2146 SMART arm_5 263 304 IPR000225 GO:0005515
Pvu2g2701 2146 Gene3D - 1651 2023 IPR011989 -
Pvu2g2701 2146 Gene3D - 1313 1650 IPR011989 -
Pvu2g2701 2146 Gene3D - 43 411 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2701 Pvu-Chr2 42880456 42891708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2701 491 615 U-box Gene Family AT3G46510 32.540 3.69e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2701 - - gmx:100794002 3826.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2701 2 42880456 42891708 Pvu2g2701 2 42880456 42891708 ECH
Pvu2g2701 2 42880456 42891708 Pvu1g2584 1 50796359 50806856 PCT