Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2679 ATGCACTCTCCACCTTCTATTCAAATCTCCCTACCCCAACCACAACAACATCGTCATCATGTACATGTACATGTACATGCAAATGCTCCTCTCTTTTTTCTTAACTCTCCCCTTCTCTTCCTCTCCCATTATTTCAATGTCCTCATGGGAAAAACCAAAATTTTCAATTTTTTTGCCAATGGCACCAGTAATTACATGCTTCCTACCTCCAATACTATAAGGCAGTCTCTTGTAAACCGGCCAAGTTCCCACAAAGATTGCTTTCCCTTTTCACGCTTTGGATTCTTGCGCCGCTTCATTCCTTCAAGAAAAGTTAATGGGGGCTCAAAAACTGAGGATGAGGAGAAAGTCTACTCTTGGTTATACACCTTGGCTCAGACTGATAAGAACTTGGTCTTTGAGTACGTTAGGTCCACTGAAAGAGGCTTAAGCTTCACAGAAGCAGAGAGGAGACTTCGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTACGAAATGCTCTTTTCCACCCTTTTAATATCATTCTGATTGTTTTGTCAGTTATGTCATTCATTGCCCGTGACAGTCCAAATGGATTTATCATGCTCGTGCTGGTTTTCATCAGTGTCACCCTCCGTTTCTATCAGGAATACAACAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCTGGTAGAGTTGTTCAGAAAGAACTTGTTGTTCAAGTTGATCACAGGGATGTAGTTCCAGGTGACATTTTAATTTTTGAACCTGGAGATCTCTTTCCTGGAGATATCAGATTGTTATCTTCTAAGCAACTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGACAAAACTGCTGATATCAGAGAAGACTACACTACTCCTTTATTGGATTTAAAAAACATCTGTTTTATGGGCACAAACGTGGTATCAGGTACTGGAACAGGCCTAGTGGTTTCAACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAGCCACAAGATGAATTTGAAAAGGGTCTCAAATGGATATTTTACTTGCTTATTTCTGTTATGCTAGTAGTTGTCACCACCATGTTTGTGGTAAATTACATGACATCTCTTGATTTGACCCAAAGCGTTCTTTTTGCCATCTCTGTTGCATCTGTCCTGAATCCTCAGATGCTTCCCCTTATCGTTAACACATGCCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGGTGTATAGTAAAGAGTTTAAGATCTATACGCGACATGGGATCAATGGATATTCTTTGTATTGACAAGACAGGCTCCCTTACAATGAATCATGCAATCATGGTTAATCATCTTGACTACATGGGTTTACCCCAAGAAAAAGTTTTACGCTATGCCTTCCTCAACTCCTACTTTAAGACTGATCAGAAGTATCCTCTGGATGATGCTATTCTGGCATTTGTATATTCAAATGGATTCAGGTTTCGGCCATCTAAGTGGAGGAAGATAGATGAGATTCCCTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAGGACAGACACTCACAATTCTTTGGCAGGTTCATGGTAACAAAAGGAGCACTATTAGAAGTATTGAAAGTTTGTTCTTTCATTGAGAATTTCGATAAAGATGAAATTTGCCTCTTCTCTTCCGATGATTATCAGCGTATTTTAAATCTTTCAGAAGATATTAGCAATGAAGGGTTAAGGATTTTAGGAGTAGCTATAAGGAAGCTTGAAATGACACAAACATGTGAAACAAGTAATGGAAGCAAGAGAGAAGACGAGGATATCGAAAAAGACATGGTGTTCCTTGGCCTCATAACGTTTTTCGACCCACCTAAGGACACAGCAAAGCAAGCACTGTGGCGTTTGTGTGAGAAGGGAGTGAAAGCAAAGGTTTTAACAGGTGATTCCCTCTCCTTGACAACGAGGGTATGCAGGGAAGTTGGCATAAGCACCAATCACGTAATAACAGGTCCTGAACTAGAGCTACTTGATCAAGACACGTTCCATGAGACAGTTAAAAGAGCCACAGTACTAGCACGTCTCACTCCAATTCAGAAACTCCATGTGGTGCAATCCTTGCAAACAGTTGGAAACCATGTTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTGGCTTTAGATGCAGCAAATGTAAGCATTTCTGTGGATTCAGGAGTGGCCATTGCAAAGGACATGGCAGATATTATCTTACTTGAGAAAGACCTCAACGTGCTTGTTGCGGGAGTGGAGCATGGCAGACTCACTTTTGGCAACACAATGAAGTATGTTAAGATGTCAGTTATTGTTAACTTGGGAAGTGTCATTTCACTCCTCATAGCAACACTGCTTTTGAAGTATGAGCCCCTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAGATTGCCATTGCCTGGGACAAGATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAAAGAGGCTTGTTCATGTTCATATTATGGAATGGATCAGTGTGCACTCTGTGTGATGTGGCAACACTCATGCTTCTTTGGTTTTATTACAAGGCTTACACTGATGTGACTCAAAAGTTTTTCCATTCAGCTTGGTTCATTAAAGGTCTCCTCTTGCAGACCCTCATCATCCACTTGATCAGGACAGAGAAAATCCCTTTCATACAGGAGGTTGCATCTTGGCCTGTGATTTTCTCTACTGTTCTGACTTCTGCAATTGGGATTGCACTTCCTTTCACATCCATTGGGAAGGTCATGGGATTCTCCCTTCTGCCTCTCTCATATTTCGGATTTTTGCTACTTCTTTTTCTTGGATATTTTGTAGTTGGCCAGGCAGTTAAGAGATTTTACATATTGGTTTATAAGAAATGGCTTTGA 2985 0.4084 MHSPPSIQISLPQPQQHRHHVHVHVHANAPLFFLNSPLLFLSHYFNVLMGKTKIFNFFANGTSNYMLPTSNTIRQSLVNRPSSHKDCFPFSRFGFLRRFIPSRKVNGGSKTEDEEKVYSWLYTLAQTDKNLVFEYVRSTERGLSFTEAERRLRENGPNVPLEYSFPRWWHLLRNALFHPFNIILIVLSVMSFIARDSPNGFIMLVLVFISVTLRFYQEYNSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDHRDVVPGDILIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTADIREDYTTPLLDLKNICFMGTNVVSGTGTGLVVSTGSNTYMSTMFSKVGKKKPQDEFEKGLKWIFYLLISVMLVVVTTMFVVNYMTSLDLTQSVLFAISVASVLNPQMLPLIVNTCLAKGALAMAKDRCIVKSLRSIRDMGSMDILCIDKTGSLTMNHAIMVNHLDYMGLPQEKVLRYAFLNSYFKTDQKYPLDDAILAFVYSNGFRFRPSKWRKIDEIPFDFIRRRVSVILETEDRHSQFFGRFMVTKGALLEVLKVCSFIENFDKDEICLFSSDDYQRILNLSEDISNEGLRILGVAIRKLEMTQTCETSNGSKREDEDIEKDMVFLGLITFFDPPKDTAKQALWRLCEKGVKAKVLTGDSLSLTTRVCREVGISTNHVITGPELELLDQDTFHETVKRATVLARLTPIQKLHVVQSLQTVGNHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIVNLGSVISLLIATLLLKYEPLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKSSERGLFMFILWNGSVCTLCDVATLMLLWFYYKAYTDVTQKFFHSAWFIKGLLLQTLIIHLIRTEKIPFIQEVASWPVIFSTVLTSAIGIALPFTSIGKVMGFSLLPLSYFGFLLLLFLGYFVVGQAVKRFYILVYKKWL* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2679 994 Gene3D - 462 638 IPR023299 GO:0000166
Pvu2g2679 994 Pfam E1-E2 ATPase 244 429 - -
Pvu2g2679 994 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 115 993 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PANTHER CATION TRANSPORTING ATPASE 102 993 - -
Pvu2g2679 994 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 445 641 IPR023299 GO:0000166
Pvu2g2679 994 Gene3D - 234 338 - -
Pvu2g2679 994 Gene3D - 447 771 IPR023214 -
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 363 379 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 380 399 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 484 497 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 792 807 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 842 855 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 862 878 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 897 918 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 PRINTS Magnesium-transporting ATPase signature 947 968 IPR006415 GO:0015444|GO:0015693|GO:0016021
Pvu2g2679 994 Pfam Cation transporter/ATPase, N-terminus 134 191 IPR004014 -
Pvu2g2679 994 SUPERFAMILY HAD-like 625 782 IPR036412 -
Pvu2g2679 994 SMART Cation_ATPase_N_a_2 123 196 IPR004014 -
Pvu2g2679 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 203 490 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g2679 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 700 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g2679 994 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 102 993 - -
Pvu2g2679 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 991 IPR023298 -
Pvu2g2679 994 Pfam haloacid dehalogenase-like hydrolase 447 748 - -
Pvu2g2679 994 Gene3D - 199 946 - -
Pvu2g2679 994 SUPERFAMILY Calcium ATPase, transduction domain A 244 349 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2679 Pvu-Chr2 42607438 42613069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2679 141 886 Primary Pumps ATPases(2) AT1G10130 26.471 3.70e-64 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2679 K01531 - pvu:PHAVU_002G260400g 1863.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2679 2 42607438 42613069 Pvu2g2679 2 42607438 42613069 ECH