Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2665 ATGTTGGGAGAAGACAGTAACAACGCGGAAACCGGTGTTCACTGGAGAGCACATTCCAGATCAGTTTCCTGGACCGACCAGACTCCGGTGACCCGGAAACCGCCGCGATCCCTTCAGCCTCTTTGCATCAGAAAACACAGTGTGAAGGAGTGGCCGAGCGCCGGCAGCGACGATCTCGAGGATTGGCTTCCGCCACTGACCCCAAGAGGGTCCACCAAAGGATCAGCAAATTTGGGTTCGGGTTCGGGTCATGTTTTTCAGCTTGGGAGAGACAAGTTGGCTTTCTTCGACAAGGAATGTTCAAAAATCGCGGAGCACGTGTACTTGGGGAGTGACACGGTGGCAAAGAACGAGGAGGTTTTGCGGCGGCACGGGATAACGCACGTGCTGAATTGCGTGGGGTTCGTTTGCCCCGAGTATTTCAAAAGCAACTTCGTCTACCAAACGCTATGGCTGCGGGACAGTCCCTCGGAGGACATCACCAGCATTCTCTACGACGTTTTCGATTACTTCGAGGATGTCCGACAACAGGGTGGGCGCGTGCTCGTGCACTGCTGCCAGGGCGTGTCGCGTTCGACCTCCTTGGTCATCGCGTATCTCATGTGGAGGGAGAGCCAGAGCTTCGAGGACGCGTTTCACCTGGTGAAGAACGCGCGTGGCATCACCAATCCGAACATGGGTTTCGCCTGTCAGCTATTGCAGTGTCAGAAGCGCGTGCATGCTATGCCCCCGAGTCCTAGTTCCGTGCTGAGAATGTATAGGATGGCTCCTCATTCTGCCTACGACCCTCTTCACCTTGTTCCTAAGACCGTTAACCACCCTTGCGCCCACGCGCTCGATTCGCGTGGGGCGTTTATTGTGCATGTTCCTTCTACTTTGTACGTGTGGGTTGGGAATGAGTGTGGCACGGTGATGTGTTGCAAGGCACGTTATGCAGCTGCTCAGGTTGTTCGATATGAGAGGGCAACTGGGGAGATTGTTGGTGTGGTTGAGGATGAAGAGCCTAAGGAGTTTTGGGTTGCTCTTTCTCACAAGGAAGTGTTGGTGGGGGATGAAGAAGAGGTGAAGAACGTGGAAACAATGCAGGTTGATGTGGGGCTTCATCCCCGGAGAGTTGAGGAATATGATTTGGACTTTGGAATTTTTCATAAGGCACTTGCAGGTGGGGTTGTTCCACCTTTTTCTTTCTCTAATGCTGGATCAGAAAATTGCCTCCCTTCTAAGGAAAATGGTTGGGGGAGATTGAGTAGGAAGGTTTCACATTGA 1266 0.53 MLGEDSNNAETGVHWRAHSRSVSWTDQTPVTRKPPRSLQPLCIRKHSVKEWPSAGSDDLEDWLPPLTPRGSTKGSANLGSGSGHVFQLGRDKLAFFDKECSKIAEHVYLGSDTVAKNEEVLRRHGITHVLNCVGFVCPEYFKSNFVYQTLWLRDSPSEDITSILYDVFDYFEDVRQQGGRVLVHCCQGVSRSTSLVIAYLMWRESQSFEDAFHLVKNARGITNPNMGFACQLLQCQKRVHAMPPSPSSVLRMYRMAPHSAYDPLHLVPKTVNHPCAHALDSRGAFIVHVPSTLYVWVGNECGTVMCCKARYAAAQVVRYERATGEIVGVVEDEEPKEFWVALSHKEVLVGDEEEVKNVETMQVDVGLHPRRVEEYDLDFGIFHKALAGGVVPPFSFSNAGSENCLPSKENGWGRLSRKVSH* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2665 421 MobiDBLite consensus disorder prediction 52 78 - -
Pvu2g2665 421 Pfam Dual specificity phosphatase, catalytic domain 107 237 IPR000340 GO:0008138|GO:0016311
Pvu2g2665 421 CDD DSP 100 234 - -
Pvu2g2665 421 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 91 242 IPR029021 -
Pvu2g2665 421 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 158 219 IPR000387 GO:0016311|GO:0016791
Pvu2g2665 421 ProSitePatterns Tyrosine specific protein phosphatases active site. 183 193 IPR016130 GO:0016311|GO:0016791
Pvu2g2665 421 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 36 419 - -
Pvu2g2665 421 MobiDBLite consensus disorder prediction 19 38 - -
Pvu2g2665 421 ProSiteProfiles Dual specificity protein phosphatase domain profile. 99 241 IPR020422 GO:0006470|GO:0008138
Pvu2g2665 421 SUPERFAMILY Actin depolymerizing proteins 244 348 - -
Pvu2g2665 421 SMART dsp_5 99 238 IPR020422 GO:0006470|GO:0008138
Pvu2g2665 421 MobiDBLite consensus disorder prediction 19 34 - -
Pvu2g2665 421 Gene3D Severin 251 348 IPR029006 -
Pvu2g2665 421 PANTHER MKPA PROTEIN 36 419 - -
Pvu2g2665 421 Gene3D Protein tyrosine phosphatase superfamily 88 241 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2665 Pvu-Chr2 42508833 42510463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2665 34 135 Protein tyrosine phosphatase (PTP) family AT3G55270 49.091 2.60e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2665 - - pvu:PHAVU_002G259000g 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2665 2 42508833 42510463 Pvu2g2665 2 42508833 42510463 ECH
Pvu2g2665 2 42508833 42510463 Pvu1g2641 1 51235066 51238472 PCT