Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2640 ATGGCTGAGGCCAGACACTACGTTCCCCCCTCTCAGTTGGATATCGAGCAAATTATTGTAGAAGCACAGCATCGATGGCTGCGTCCGGCTGAAATTTGTGCAATTCTCAGCAATTACACGAAGTTTCGAATTGCTCCAGAACCTGCTCATATGCCACCAAGTGGTTCACTTTTCTTATTTGATCGGAAGGTGCTGAGATACTTCAGAAAGGATGGCCACAACTGGAGGAAGAAAAAAGATGGAAAAACAGTAAGAGAAGCACATGAGAGACTAAAGGCTGGAAGTGTGGATGTTTTGCACTGCTACTATGCTCATGGAGAAGAAGATGAGAATTTTCAGAGACGTACATATTGGCTGCTTGAAGAGGAACTCTCTAACATTGTTCTAGTTCATTATCGACAAGTGAAGGGAACCAAGTCAAATTATACATGTGCTAAAGAAACTGAAGAATCTCTTCCTTATGCTCAACAAACTGACAAAATTATGGTCAAAGCAGAGATGGACACTTCTTTTTCATCCACTCTTCGTCCAAACAGTTACCAGGTTCCTTCACAAACTACGGATACAAGCATGAACAGTGCCCAATTATCAGAATATGAAGAAACTGAATCTGCATTCAATAGCCATGCAAGTTCTGAGTTTTATTCTTTCCTTGAGTTACAACGCCCTGTTAAGAAGATTATAGATCAACCTGCTGATTCTTATTCTCCTCAGCCACTCATAAATGAGCAAAAGAAGTTACCTGTCATTGCTGAGGTGAATCATATCTCACTCACTCAAGACAGAAAAATCATAGACATTCATAATGTTGGATTGACGTATGAGTCCCCAAAACCCCTGGGCTTCTCCTCGTGGGAAGATATCTTAGGAAATAATGGTGAAAGTCAACACGTGCCTTTTCAGCCTTTATTTCCTGAAATGCAACCTGATAACATGCGAGTCAATAGCAATTTTTGTCAAGGAGATGACATAATTGTGCCACATTTGACCACCAGCATTGCTCAGCTGCATGACAATGGAAGTATCATACAAGCTGAAGGAAGTTGGCAGGGATATAGTGTTGATTCTTTACGCATGTCCACTTGGCCTATTGACAGTGTCCATTCAAGCTCGGCATGCGAGGTTAGTTGTAGCAAATGTGAGCATGAAGTTAATGAAGTTGATTTTCAAAAATCCTTGGAACAGTCTCTTCTCCATCCACACAAACAAAACAAGGTTCTGATGCTAAATGACCCTCAAGAGATACTTCTGAATACAAAAGAAGAGCCAAAATCAGATTTTGAGGCCAATAGAACCCTAGATGGAATAGAAGACACACGTTTCGCTTTTAAAAGGACTCTGTTAGATGGATTCCCAGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCTACCAGTGGATGAGTAAAGAGCTTGGAGATGTGGAAGAATCAAATAAACCATCTACTTCAGGTGCTTATTGGGATACAGTTGAAAGTGAGGTTGGCAGCACAACTATTCCTTCCCAAGGGCACCTGGACACCTATGTATTGGATCCATCTGTTTCCAATGATCAGCTTTTTAGCATTATTGACTATTCCCCAGGCTGGGCATTTGAAGGGTCAAAAACTAAGATTATCATTTCTGGACGATTCTTAAGAAGTCAACAAGAAGCAGAACTATGTAAATGGTCATGCATGTTTGGTGAGGTTGAAGTGCCTGCAGTGATACTCACAAAAGATGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAGGTCAACTGTACTCAAGAAGTCAACACTGCAGGTGATGATAGAGCCAGCACTTTGTCTACTTTTAGTAGACGATTTGGAGAACTGTTGTACCTAGGGCATGCCTTTCCTCAGAATTCTTATTCAATCAGTGGAAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTCTGCTACGGGGGGAGGATGATGTTTGGGACAAGCTACTGGAACTTACACTACAGAAAGAATTTTCTCCAGAAGATTTACAGGAGCATCTGCTTCAAAATCTTCTAAAAGATAGGTTGCACGCATGGCTCCTTCAGAAAATTATTGACGATGGGAAAGGCCCCAATGTATTGGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCTGCTGCTCTTGGCTACGATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTGAATGTGAACTTTCGTGATGTGAATGGATGGACTGCTCTTCATTGGGCAGCATTTTATGGCAGGGAGCGCACAGTTGCTTTCCTCGTATCTCTTGGCGCTGCAACTGGATTAGTGACTGATCCATGTCCAGAATACCCTTCTGGTAGGCCTCCAGCTGACCTAGCTTCTGCAAATGGACATAAAGGAATTGCAGGGTATCTCTCAGAATCTTATTTAAGTGAACAGCTCACAACTCTTGATTTGAACAAGGATGTGGGAGAAAGTCCTGGAACCAAAGTAGTCCAAAGAATCCAAAACATTGCCCAAGTTAATGATCTTGATGGTCTATCTTATGAACAGTCACTGAAAGATTCATTGGCTGCAGTGTGCAATGCCACCCAAGCTGCTGCTCGTATTCATCAAGTTTTCAGAATGCAATCATTCCAGAGAAAGCAACTGGAGGAATTTGGTGATGACAAATTTGGAATATCCGATGAACGAGCTCTTTCACTTGTAAAAATGAATGGGAAATCACACAAGTCTGGATCACGCGATGAACCGGTCCATGCTGCTGCAATACGTATCCAGAACAAATTCCGTGGCTGGAAGGGCAGAAAAGAATTTTTGATGATTCGACAACGTATAGTAAAAATTCAGGCTCACGTGAGAGGACACCAGGTTAGGAAAAATTGTGGGAAGATAATTTGGACTGTTGGGATATTGGAGAAGGTTATTTTGCGTTGGCGTCGAAAAGGTAGTGGTTTGCGAGGATTTAAGTCAGAGGCCAATTCTGAGGTAACTATGATACAAGATATAACTTCCCCTGAGGAGGACTACGATTTCTTAAAAGAAGGCAGGAAGCAAACTGAGCAAAGATTGGAGAAAGCCCTAGCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGGGACCAATACCGTAGGGTGTTGAATGTAGTAACTGAGATCCAAGAAAATCAGGTAAAGCATGATAGCAGTTGTAACAATTCAGAAGAAACAAGAGACTTCAATAACCTCACTGATCTTGAAGCACTGTTGGAGGAAGATATTTTCATGCCTACAGCAACTTAG 3318 0.421 MAEARHYVPPSQLDIEQIIVEAQHRWLRPAEICAILSNYTKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEEDENFQRRTYWLLEEELSNIVLVHYRQVKGTKSNYTCAKETEESLPYAQQTDKIMVKAEMDTSFSSTLRPNSYQVPSQTTDTSMNSAQLSEYEETESAFNSHASSEFYSFLELQRPVKKIIDQPADSYSPQPLINEQKKLPVIAEVNHISLTQDRKIIDIHNVGLTYESPKPLGFSSWEDILGNNGESQHVPFQPLFPEMQPDNMRVNSNFCQGDDIIVPHLTTSIAQLHDNGSIIQAEGSWQGYSVDSLRMSTWPIDSVHSSSACEVSCSKCEHEVNEVDFQKSLEQSLLHPHKQNKVLMLNDPQEILLNTKEEPKSDFEANRTLDGIEDTRFAFKRTLLDGFPAEEGLKKLDSFYQWMSKELGDVEESNKPSTSGAYWDTVESEVGSTTIPSQGHLDTYVLDPSVSNDQLFSIIDYSPGWAFEGSKTKIIISGRFLRSQQEAELCKWSCMFGEVEVPAVILTKDVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNCTQEVNTAGDDRASTLSTFSRRFGELLYLGHAFPQNSYSISGNEKSQLRSKISSLLRGEDDVWDKLLELTLQKEFSPEDLQEHLLQNLLKDRLHAWLLQKIIDDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFYGRERTVAFLVSLGAATGLVTDPCPEYPSGRPPADLASANGHKGIAGYLSESYLSEQLTTLDLNKDVGESPGTKVVQRIQNIAQVNDLDGLSYEQSLKDSLAAVCNATQAAARIHQVFRMQSFQRKQLEEFGDDKFGISDERALSLVKMNGKSHKSGSRDEPVHAAAIRIQNKFRGWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWTVGILEKVILRWRRKGSGLRGFKSEANSEVTMIQDITSPEEDYDFLKEGRKQTEQRLEKALARVKSMVQYPEARDQYRRVLNVVTEIQENQVKHDSSCNNSEETRDFNNLTDLEALLEEDIFMPTAT* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2640 1105 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pvu2g2640 1105 ProSiteProfiles IQ motif profile. 931 959 IPR000048 GO:0005515
Pvu2g2640 1105 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pvu2g2640 1105 Pfam IQ calmodulin-binding motif 931 950 IPR000048 GO:0005515
Pvu2g2640 1105 Pfam IQ calmodulin-binding motif 955 972 IPR000048 GO:0005515
Pvu2g2640 1105 ProSiteProfiles Ankyrin repeat region circular profile. 757 782 - -
Pvu2g2640 1105 Gene3D - 928 976 - -
Pvu2g2640 1105 SUPERFAMILY E set domains 522 607 IPR014756 -
Pvu2g2640 1105 Gene3D - 682 826 IPR036770 -
Pvu2g2640 1105 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1069 - -
Pvu2g2640 1105 ProSiteProfiles Ankyrin repeat profile. 757 789 IPR002110 GO:0005515
Pvu2g2640 1105 SUPERFAMILY Ankyrin repeat 701 817 IPR036770 -
Pvu2g2640 1105 Gene3D Immunoglobulins 514 611 IPR013783 -
Pvu2g2640 1105 ProSiteProfiles IQ motif profile. 953 977 IPR000048 GO:0005515
Pvu2g2640 1105 Coils Coil 1021 1041 - -
Pvu2g2640 1105 Pfam IPT/TIG domain 522 596 IPR002909 -
Pvu2g2640 1105 SMART iq_5 929 951 IPR000048 GO:0005515
Pvu2g2640 1105 SMART iq_5 952 974 IPR000048 GO:0005515
Pvu2g2640 1105 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pvu2g2640 1105 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 1 1069 - -
Pvu2g2640 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 925 979 IPR027417 -
Pvu2g2640 1105 Pfam Ankyrin repeats (3 copies) 729 819 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2640 Pvu-Chr2 42310465 42317944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2640 1 1086 CAMTA Transcription Factor Family AT5G64220 45.167 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pvu2g2640 Ank_2 2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2640 K21596 - gmx:100798875 1864.35