Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu2g2589 | ATGAATAACGAATTCAATGTGTATTACTCTGCCAGAGGACCCGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTATGAAACACAATTTGGTAGCACCTGGAAATTCTATATGGGCTGCTTGGAGTTCTGTTGCCTTTGATTCTGTTGAATTTCAAGGTGAGAATTTTGCATTGATGTCTGGCACAGGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCGCCAGTTAAGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCCTCACTTTCCACCTCAGCTTCTCTGTATGACAACAATGGGAGGTCAATATTGGCTCAGATATCATATCCTACTGTAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCAGGATTACTCTTAGTTTCTAGCTATGATGATTACATGTCATTCCTATGTGGTATCGATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAACTCTACAGTATATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAAGGTTGAACCAATCTAGAGTAGTGCAAAGAACAATCCAAAATATTGCTGGAAATGAAACATACAATGTTGGTTTTAGTGCTCCATATGGCACTTCTATGAAAGTGTCTCCCAATCACTTCTCTCTAGGCAGTGGGGAGAGACAAGTCTTGTCTGTGATCTTCAATGCAACCAGCAACAGCTCTGCTGCCAGCTATGGGAGAATCGGGCTGTATGGTAACAAAGGTCATGTTGTCAACATTCCTGTGGCAGTCATTTTCAAAATCTTATAA | 852 | 0.4261 | MNNEFNVYYSARGPDPEDSLPHEADIMKHNLVAPGNSIWAAWSSVAFDSVEFQGENFALMSGTGMAAPHVAGLAAPVKQKFPNFSPAAIGSSLSTSASLYDNNGRSILAQISYPTVDLNLSPATPFDMGSGFVNATAALNPGLLLVSSYDDYMSFLCGIDGSTPTVLNYTGQNCWTYNSTVYGPDLNLPSITIARLNQSRVVQRTIQNIAGNETYNVGFSAPYGTSMKVSPNHFSLGSGERQVLSVIFNATSNSSAASYGRIGLYGNKGHVVNIPVAVIFKIL* | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu2g2589 | 283 | Gene3D | Peptidase S8/S53 domain | 8 | 152 | IPR036852 | GO:0004252|GO:0006508 | |
| Pvu2g2589 | 283 | PANTHER | TRIPEPTIDYL-PEPTIDASE II-RELATED | 7 | 282 | - | - | |
| Pvu2g2589 | 283 | Pfam | Subtilase family | 24 | 101 | IPR000209 | GO:0006508|GO:0008236 | |
| Pvu2g2589 | 283 | Pfam | Fibronectin type-III domain | 185 | 278 | IPR041469 | - | |
| Pvu2g2589 | 283 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 7 | 282 | IPR045051 | - | |
| Pvu2g2589 | 283 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 139 | - | - | |
| Pvu2g2589 | 283 | Gene3D | - | 156 | 280 | - | - | |
| Pvu2g2589 | 283 | SUPERFAMILY | Subtilisin-like | 5 | 140 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu2g2589 | Pvu-Chr2 | 41823135 | 41824547 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu2g2589 | 7 | 282 | Subtilisin-like Serine Gene Family | AT4G20430 | 63.043 | 4.59e-121 | 364 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu2g2589 | - | - | pvu:PHAVU_002G251500g | 571.622 |