Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2582 ATGGGGAAAAAGCTTGGTCCATGCTTCCATTGTGGAATTGATGTGACTCCACTTTGGCGTAATGGACCAGAAGACAAACCCGTGTTGTGCAATGCATGTGGATCAAGATATAAGAAACGTGGAAGCCTTGGTCTTGAGGACTATCTGCCCAAGAATTTTCAACCTCAGTACTTTGGCAAGTATAAAGATCTGAAGGTTGACAAGAGTGCACATCTATGGAGTACTAAGATTCCTACAAGGAAACGTTCAGAAGTGGTTTACAAGGAGATAACACCATTGGAGAGATTCCATATAAGACTACTTCAGATGTCAAAAAACTACAGGAACCCAACTGAGTCACCCTCAGAAGAAGTATTATTGTTGAATAACGTAAATAACTTCATACCTTGTAATGAAATAGGCATAGGATGTGTTATTCTTAAATAA 426 0.392 MGKKLGPCFHCGIDVTPLWRNGPEDKPVLCNACGSRYKKRGSLGLEDYLPKNFQPQYFGKYKDLKVDKSAHLWSTKIPTRKRSEVVYKEITPLERFHIRLLQMSKNYRNPTESPSEEVLLLNNVNNFIPCNEIGIGCVILK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2582 141 PANTHER OSJNBB0038F03.10 PROTEIN 14 141 IPR044589 -
Pvu2g2582 141 Pfam GATA zinc finger 8 42 IPR000679 GO:0006355|GO:0043565
Pvu2g2582 141 CDD ZnF_GATA 7 41 IPR000679 GO:0006355|GO:0043565
Pvu2g2582 141 ProSiteProfiles GATA-type zinc finger domain profile. 8 41 IPR000679 GO:0006355|GO:0043565
Pvu2g2582 141 PANTHER GATA ZINC FINGER PROTEIN 14 141 - -
Pvu2g2582 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 51 - -
Pvu2g2582 141 SMART GATA_3 2 54 IPR000679 GO:0006355|GO:0043565
Pvu2g2582 141 Gene3D - 6 88 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2582 Pvu-Chr2 41764051 41765009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2582 1 43 C2C2-Gata Transcription Factor Family AT5G47140 72.093 9.17e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pvu2g2582 GATA 2.7e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2582 - - vun:114178599 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2197 6 31351755 31352987 Pvu2g2582 2 41764051 41765009 PCT