Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2569 ATGAACATCAAACCAAAAAAGTATGCATCTTATGATCCCAACTACATTGATAGAAACAAAGTATTCAACTTCATCAAACTCATCAATATGGAATCCATTTTTGTGGTTTTGATCTTTTTGGTAGCATCAAATCCAAGCTCAGCAACACCCTCTCCCTCTCCTTCTCCCACCATTTCACCTATTAACAGTTCTACATGCCCAGTGGCCATGAATTTTGTTCAAACAGTCCCTTGGAACATCTCTTCCTGCCATAATTTCCAACCCTTGGAATCCCAATACCAAACAAGTACAAGTCTTTGTTGCCAAACTCTCTTATCCCTCTTTGGTGTAGCTCTTGCACAAAACCTCAAGGATAACTCTCTTTTCCAACTGGCCAACCTCCCCACATCTATCTCTTGCCTCCAACACTTCCAATCCAATCTCACATCCCTCTCACTTCCCAACAGTCTTGTTTCCTCCTGCTTTGATCCACAGCAATTTGTCATCACTCCTGACATCTGTGCTCGGATTCAAAACATGGAAGATTGGCTCACCAGGCTTGGTTCTACACCACATCTCGACACTGCGTGTAAACCAGATCTTAGTGATAAAAACCAATGCAACAAGTGCGTGGCTGAGGGGTACAAGGTTCAGCAGAAGCTTAGTGCCATTGATGGTAATGAATCACATTCCCAAGATTGCTTTTACTTCACAGCACTTTACATGGCTGGAGTTGCCAATGAGTATGGCCCTGAGAGCAGAGGTGCTTTGTCTTGCGTTTTGATTTTGATGGTTAATTCACAGGTTGATTCAAGGGATGGCCATCGTGCTCTTATGCTTGGTTTGTTTGTAGCTTCACTTGCAGTCTTGGTAATCGTGTTGTTAGGATTAGGGTTGTATTTTTGGTACACCAAGAGAAGAAGTGTTGAAAATTTGCTTTCCTATGCTGAACTACAGGAACAAAGGTTCGGGCTAAGGCTGAGACCAAATACAGTGTTAACTTGGTTTGAAATTGAGAGTCTTGTGAGGGCCACCAACAATTTTTCACCTCGTAACTTCATTGGCAGAGGTGGGTTTGGGATGGTTTACAAGGGCATTCTACCTGATGGCACAGTGGTTGCGGTGAAAAGGCTTCAAGAATCCGATTCTCAAGGAGATGCTCTGTTCTACAGTGAGATTGAGATTGTTAGCAACTTGAAGCACCGTAATCTGGTACCACTAAGAGGGTGTTGTGTGGTTGATGAGAATCACAATCTTGAGTACAGAGGAAGATATCTAGTTCATGAATATATGCCAAATGGAAGCCTTCAAGGCCATCTTTTTCCAACCAAGTTAGATAATCAATATACAAAGAAACCCCTGACTTGGACTCAAAGAAAAGGCATAGTCTTGGATGTGGCAAATGCATTGGTTTATTTGCACTTTGGAGTTAAACCTGCAGTGTATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCGAGGGTTGGAGATTTTGGGCTAGTCAAACAGAGCAGTATAAGTACGTCTCTTCTAAATACAATGGTAGTTGGAACTCGTGGATATGTAGCACCTGAATATGCACTCTATGGTCAGCTAACTGAGAAGAGTGACGTCTACAGCTTTGGTGTGGTTGTTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAGTTGTCTTCATCAGGGACACCGGTTTTCTTGATCACAGATTGGGTATGGTCATTAATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATGTTAGGAGATGGAAATTGTGCTAGAAACATAATGGAGAGGTTTTTGCTGGTTGGAATTCTTTCTTCTCACGTAATGGTTGCTTCAAGGCCAACAATTTTGAATGCCTTGAAGATGTTAGAAGGGGATATAGAGGTCCCACCAATTCCAGATAGGCCACTGATGCATGGGCACTATGTGATGTATGATGGTGATTGCTCTGGGATGAGCTCAGGATGTGGGTTTGTGAGCTCATGA 1995 0.4256 MNIKPKKYASYDPNYIDRNKVFNFIKLINMESIFVVLIFLVASNPSSATPSPSPSPTISPINSSTCPVAMNFVQTVPWNISSCHNFQPLESQYQTSTSLCCQTLLSLFGVALAQNLKDNSLFQLANLPTSISCLQHFQSNLTSLSLPNSLVSSCFDPQQFVITPDICARIQNMEDWLTRLGSTPHLDTACKPDLSDKNQCNKCVAEGYKVQQKLSAIDGNESHSQDCFYFTALYMAGVANEYGPESRGALSCVLILMVNSQVDSRDGHRALMLGLFVASLAVLVIVLLGLGLYFWYTKRRSVENLLSYAELQEQRFGLRLRPNTVLTWFEIESLVRATNNFSPRNFIGRGGFGMVYKGILPDGTVVAVKRLQESDSQGDALFYSEIEIVSNLKHRNLVPLRGCCVVDENHNLEYRGRYLVHEYMPNGSLQGHLFPTKLDNQYTKKPLTWTQRKGIVLDVANALVYLHFGVKPAVYHRDIKATNILLDADMRARVGDFGLVKQSSISTSLLNTMVVGTRGYVAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALELSSSGTPVFLITDWVWSLMKSGNIGEALDASMLGDGNCARNIMERFLLVGILSSHVMVASRPTILNALKMLEGDIEVPPIPDRPLMHGHYVMYDGDCSGMSSGCGFVSS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2569 664 SMART serkin_6 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2569 664 Pfam SPARK 62 228 IPR043891 -
Pvu2g2569 664 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Pvu2g2569 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu2g2569 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 60 643 - -
Pvu2g2569 664 SUPERFAMILY Protein kinase-like (PK-like) 322 626 IPR011009 -
Pvu2g2569 664 Gene3D Phosphorylase Kinase; domain 1 307 423 - -
Pvu2g2569 664 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 60 643 - -
Pvu2g2569 664 ProSiteProfiles Protein kinase domain profile. 341 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2569 664 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pvu2g2569 664 Pfam Protein kinase domain 345 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2569 Pvu-Chr2 41630887 41633569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2569 63 651 Receptor kinase-like Gene Family AT1G11050 56.689 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu2g2569 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2569 - - vra:106765729 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2229 6 31565113 31567972 Pvu2g2569 2 41630887 41633569 PCT