Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2560 ATGGATTCTCGTGGCATTCCCCAAGGCCCTACTCCACCCAGGGAGCCTGAAGGGCATAATGAAGCGGTTTTCTTACATGGGGACTTGGATCTGTTGATAATTGAAGCCAAGTCTCTTCCAAATTTAGATTTATCTTCTGAAGCAGTTAGAAAATGTATGACTATGGGCAACATGTGCCATCCTCCATTCATGAAAGGACTAAAGTCACACTCTGGAAAAGATAAGATGATAACAAGCGACCCTTATGTTTCAGTATGCATATCTGGGGCAACCGTGGCTCGAACTAGAGTGATTCCTAACTGTGAGAACCCTTTGTGGGATGAGCAATTTATTGTGCCTGTTGCTCACCCTGCTCACAAATTGGAGTTCGTTGTGAAGGATAATGATATTCTTGGAGCTGAACTCATTGGAGTGGTGGAGATACCTGTTCACAAGATAGTTTCAGGAAATACTATCAATGATTGGTTTCCTATCATTGGTCAGTGTGGAAACTGCTTAAAACCTTATCCTGAATTGCATATTTCTGTTCAATATAAGCCAATTGGAGCCAACCGTTCAGAAAAAAGGGTGAATGAGGATGGAACAGCATATTTAGGAATTCCTAAAACCTATTTCCCTCTCAGAAAAGGAGGGAGTGTGACTCTATATCAAGATGCACATTTACCAGATGGTATGCTACCTGAAATTCCACTTGATGGTGGAAAAGTGTTTCAGCAAAGTAAATGTTGGGAGGACATATGCCATGCAATTTTGGAAGCTCATCACATGATATACATTATAGGATGGTCTGTTTACCACCCTGTGAGGCTTGTGAGAGAGGCAACAAAACCAGTACCTTCAGGGGGAGAGCTTTCACTTGGAGAACTGTTGAAGTACAAGTCACAAGAAGGACTCAGAGTGGTTATGCTGATTTGGGATGACAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTCATGCAGACTCATGATGAAGAAACTAAGAAGTTTTTCAAACATTCCACTGTTCATTGTGTGCTATCTCCACGTTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTCTTTACACATCACCAGAAATGTGTGATTGTAGACAGTCTAGGTTCTGGGAATAATCGGAAAATAACAGCTTTTATTGGTGGTTTGGATCTATGTGATGGTAGATATGATACGCCTGAGCATAGGCTTTTTCGTGATCTAGATACAGTTTTTCATAATGATTTTCACAATCCTTCTTTTCAACAACTAAGTTCGAATTCTTGTGCCCCAAGGCAACCATGGCATGACTTACATTGCAAAATTGAAGGTCCAGCAGCATATGATATATTAACCAACTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGTGACTTCAGACTCAAAAAGGTGACAAACTGGCATGATGATGCTTTGCTTCGGCTGGACAGAATTTCATGGATTGTCAAACCTGCTCCTTGCCCCAGTGGTGAAAAAGCTGTTTATGTAACAGATGAAAATGATCCTGAGAGTTGGAATGTGCAGGTGTTTAGGTCCATAGATTCTGGATCTGTAAAAGGCTTTCCAAAGGATGTTGACAAAGCTAAGGCTCAGAATCTTTTGTGTGGAAAAAATTTGAAAGTTGATCAAAGCGTCCATACTGCTTATATAAAAGCAATAAGATCAGCCGAGCACTTTGTATATATTGAGAATCAGTATTTTTTGGGCTCCTCCTATCATTGGCCTTCATACAAAAACAAAGCAGGTGCAAACCACTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCTGGTAAGATCAGTGTAAATGAACGTTTTTGTGTATATATAGTTATACCAATGTGGCCAGAGGGTGTTCCAACAAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTATAGCTGATGCCCTTGCAAAAGCAGGTCTCTCTGATAAGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCCCAAACCTCTAATATTTCTTCAACAACAAATCCATCTGAAAACCGCGCTTTG 2088 0.4047 MDSRGIPQGPTPPREPEGHNEAVFLHGDLDLLIIEAKSLPNLDLSSEAVRKCMTMGNMCHPPFMKGLKSHSGKDKMITSDPYVSVCISGATVARTRVIPNCENPLWDEQFIVPVAHPAHKLEFVVKDNDILGAELIGVVEIPVHKIVSGNTINDWFPIIGQCGNCLKPYPELHISVQYKPIGANRSEKRVNEDGTAYLGIPKTYFPLRKGGSVTLYQDAHLPDGMLPEIPLDGGKVFQQSKCWEDICHAILEAHHMIYIIGWSVYHPVRLVREATKPVPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVIVDSLGSGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFHNDFHNPSFQQLSSNSCAPRQPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWIVKPAPCPSGEKAVYVTDENDPESWNVQVFRSIDSGSVKGFPKDVDKAKAQNLLCGKNLKVDQSVHTAYIKAIRSAEHFVYIENQYFLGSSYHWPSYKNKAGANHLVPMELALKIAGKISVNERFCVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIADALAKAGLSDKYHPQDYLNFYCLGKREPQTSNISSTTNPSENRAL 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2560 696 MobiDBLite consensus disorder prediction 1 20 - -
Pvu2g2560 696 SUPERFAMILY Phospholipase D/nuclease 201 466 - -
Pvu2g2560 696 PIRSF PLD_plant 15 695 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu2g2560 696 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
Pvu2g2560 696 ProSiteProfiles C2 domain profile. 9 156 IPR000008 -
Pvu2g2560 696 Gene3D Endonuclease Chain A 234 480 - -
Pvu2g2560 696 PANTHER PHOSPHOLIPASE D 21 687 IPR015679 -
Pvu2g2560 696 SUPERFAMILY Phospholipase D/nuclease 551 649 - -
Pvu2g2560 696 Pfam C2 domain 27 158 IPR000008 -
Pvu2g2560 696 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 180 IPR035892 -
Pvu2g2560 696 Gene3D Endonuclease Chain A 504 687 - -
Pvu2g2560 696 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Pvu2g2560 696 PANTHER PHOSPHOLIPASE D 21 687 - -
Pvu2g2560 696 SMART C2_3c 28 155 IPR000008 -
Pvu2g2560 696 Gene3D C2 domain 23 179 IPR035892 -
Pvu2g2560 696 CDD C2_plant_PLD 22 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2560 Pvu-Chr2 41563936 41567757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2560 20 689 Phospholipase D Gene Family (Wang group) AT4G35790 58.561 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2560 K01115 - gmx:100810824 1311.98