Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2559 GTGGCAGCAAAAAAGTTCAGACGTTTTATGATTTATGTCCATGCCAAAGGAATGGTAGTTGATGACGATTACGTAATTATTGGATCAGCAAATATTAACCAGAGATCATTAGATGGTTCAAGGGACACAGAAATAGCTATGGGAGCTTATCAACCAAAATATACATGGACAGAAAATAGACCCCATCCACATGGCCAGGTGTATGGATACAGAATGTCACTGTGGGCTGAGCACCTTGGTGGTCTTGACCATGTTTTTGGTGAACCTCAGAGCCTGGAATGTGTTAGACAAGTGAACAAAATTGCAAAACAAAACTGGGGCATATATGTGGCCGACGAAGGGAATTACATGAGAGGACATTTGATGCAGTATCCAGTTAAGATCAGCAGGGATGGAAAAGTGAGTGCACTTGATGATTTTGAGTCATTTCCTGATGTCGGTGGCAAAGTTCTTGGATCACCAAATTCACTTCCGGATGCACTAACCACCTGA 492 0.4228 VAAKKFRRFMIYVHAKGMVVDDDYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTENRPHPHGQVYGYRMSLWAEHLGGLDHVFGEPQSLECVRQVNKIAKQNWGIYVADEGNYMRGHLMQYPVKISRDGKVSALDDFESFPDVGGKVLGSPNSLPDALTT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2559 163 Gene3D Endonuclease Chain A 2 59 - -
Pvu2g2559 163 SUPERFAMILY Phospholipase D/nuclease 5 83 - -
Pvu2g2559 163 SMART pld_4 9 36 IPR001736 GO:0003824
Pvu2g2559 163 PANTHER PHOSPHOLIPASE D 3 162 - -
Pvu2g2559 163 Pfam Phospholipase D Active site motif 10 36 IPR001736 GO:0003824
Pvu2g2559 163 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 9 36 IPR001736 GO:0003824
Pvu2g2559 163 Pfam Phospholipase D C terminal 83 153 IPR024632 -
Pvu2g2559 163 PANTHER PHOSPHOLIPASE D 3 162 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2559 Pvu-Chr2 41558020 41558830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2559 5 162 Phospholipase D Gene Family (Wang group) AT4G11850 61.392 8.88e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2559 K01115 - pvu:PHAVU_002G2487001 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2559 2 41558020 41558830 Pvu2g2559 2 41558020 41558830 ECH