Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2510 ATGCCTCGCAAAGTCAATTACGGACTCGATTTGGACGACGACTATTACTACGATGATGATTATGACGACTATGATTATGATTCTGTCGATGCAGAAGACTCTGGAGGACCTGATACAAAGCAAGAGACCATTAGGCCAGGTCTTTGGCAATGCCCCATATGCACTTATGACAATGAGGACAGTATGACATTTTGTGATATTTGTGGTGTTGTACGTCGACCCTTGCCTAACATCGGAGCTTCCGACAATAGCAAAATAGCTGAAGACATAAGCAAAACTCCTGGAGTATCCAAGTTGGCTAGGTCTCTTTTTCATTCATTACCACAACAGATTCCCAAAGAGGTTGTATTATTTCCAAAGCCGGGTGATGGTTTTCTGACAGATGCCAGTATCTCCTACAAGCTTGAGAATGTCCGGGGAGAATTTCATGAAATTCATAAAGATTTTAGTACTCAGATCCATCCGCACTTAAACATAGATCCTTTCAAGTTCAATGTTCCATCCCCTGATGATGTTGTTTATACTGGTCTGCATTCTTCCAAAATGGGGTTGAAAGACAAAGTTACAAACAAAAAAAGTTCGAAACTTTCATCAAGTGTCAGAGAGATAAATGATCATTCTGTACAATCAAATGCTGAAAGTTCAGACAACTTATCATCCTTAATGCAAAAGAGCAGGCGGGATAGTTCAGCTGAGAGCAAACTTTCAAAAAATATAGCAACTGATGTGCAAACAAGTGGTAAAACTTCAAACAGCTTGCCAGAATCTCTGCCAAAAGACAAAGGTGAAAATATTAATAAAATAAAGTCTTTGAAAAATGGTACAATTGATATTCAATCAAGCAAAGAGAAGTCAGGCAGTTTGTCTGCACTGTCAAAAGTCAAGGAAAGTGATAAGAATAGTTTCTCTTCTATCAAAGATGGAAAACAAGGAAGTATTTCCAGCAATTTCAACATGACTGTTGATGTAAGATCTGGAAATTCAGGCCATACTAATGCTAAGGAACCTCGTTCACATGTTTCTTATAAGCCAGAAAAATGGATGCTACCTCAACAAGCTGAAGATACACTGACTCAGCTGAATCTTGCAATTGTTGGCCATGTTGATTCTGGAAAATCAACCCTATCTGGTAGGTTACTGCACCTATTGGGACGTATTTCCAAGAAAGAGATGCACAAAAATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCTTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAAAGGGGAATTACTATGACAGTTGCTGTTGCTTATTTTGACACCAAGAAATATCATGTTGTTTTGCTCGACTCTCCTGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGCAACAAAGGGCAAACAAGGGAGCATGCACAACTTATCAGAAGTTTTGGTGTTGATCGGGTCATAGTTGCTGTAAATAAGATGGATGCTGTTGCGTACTCCAATGATCGATTTAATTTTATAAGGAAGCAGCTGGGAGGTTTTCTGCACTCATGTGGTTTCAAAGAATCTTCTCTATCTTGGATTCCCATGAGTGCCATGGAAAATCAAAATTTGGAAGCATCCCCTTCCGACACCCGTTTCAAAAACTGGTATGATGGACCTTATCTGTTAGATGCGATTGACTCTCTCGAAGCTCCTACTAGAGAATTTTCAAAACCTCTACTAATGCCAGTATGTGATGTCATCAAATCAACTATGCTTGGACAGGTATCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTAGTGGGAACAGTACGCTCATTGGAGCGTGACTCCAATGCCTGTACTGTCGCAAGAGCTGGAGATAATGTAGCTGTAACATTGCAAGGTGTTGATGGGAATCAGGTGATGGCAGGAGATGTACTATGCCATCCCGACTTTCCTGTTGCAGCTGCTCAGCATTTGGAGTTGAAAGTGCTAGTGTTGGATGGTGCTAGTCCAATATTGGTGGGCACACAGTTGGAGTTTCATATACACCATGCGAAGGAACCTGCTAGAGTTTCAAGAATAGTGTCAGTACTCGATCCCAAGACTGGTAAGGTGACTAAAAAGTCGCCTCGCTGTCTCATTGCAAAGCAAAGTGCAGTAATTGAGGTGGTTTTGCATAAGTCGGTCTGTGTGGTAGAGTTCTCTGGTTGTAAAGCTCTTGGAAGGGTGTCCCTAAGATCCATGGGAAGAACAATTGCTGTTGGAGTTGTGACAAGAATAATTGAGGACGAAGGTTAA 2367 0.4123 MPRKVNYGLDLDDDYYYDDDYDDYDYDSVDAEDSGGPDTKQETIRPGLWQCPICTYDNEDSMTFCDICGVVRRPLPNIGASDNSKIAEDISKTPGVSKLARSLFHSLPQQIPKEVVLFPKPGDGFLTDASISYKLENVRGEFHEIHKDFSTQIHPHLNIDPFKFNVPSPDDVVYTGLHSSKMGLKDKVTNKKSSKLSSSVREINDHSVQSNAESSDNLSSLMQKSRRDSSAESKLSKNIATDVQTSGKTSNSLPESLPKDKGENINKIKSLKNGTIDIQSSKEKSGSLSALSKVKESDKNSFSSIKDGKQGSISSNFNMTVDVRSGNSGHTNAKEPRSHVSYKPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVLLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGNKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYSNDRFNFIRKQLGGFLHSCGFKESSLSWIPMSAMENQNLEASPSDTRFKNWYDGPYLLDAIDSLEAPTREFSKPLLMPVCDVIKSTMLGQVSACGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDGNQVMAGDVLCHPDFPVAAAQHLELKVLVLDGASPILVGTQLEFHIHHAKEPARVSRIVSVLDPKTGKVTKKSPRCLIAKQSAVIEVVLHKSVCVVEFSGCKALGRVSLRSMGRTIAVGVVTRIIEDEG* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2510 788 PRINTS GTP-binding elongation factor signature 361 374 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 PRINTS GTP-binding elongation factor signature 420 428 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 PRINTS GTP-binding elongation factor signature 440 450 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 PRINTS GTP-binding elongation factor signature 456 467 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 PRINTS GTP-binding elongation factor signature 501 510 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 CDD EF1_alpha 361 580 - -
Pvu2g2510 788 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 681 784 IPR009001 -
Pvu2g2510 788 Pfam Elongation factor Tu C-terminal domain 676 783 IPR004160 -
Pvu2g2510 788 SMART zf_4 47 71 IPR001876 -
Pvu2g2510 788 CDD HBS1_C_III 675 783 - -
Pvu2g2510 788 SUPERFAMILY Ran binding protein zinc finger-like 47 72 IPR036443 -
Pvu2g2510 788 ProSitePatterns Zinc finger RanBP2-type signature. 49 68 IPR001876 -
Pvu2g2510 788 PANTHER OS04G0595300 PROTEIN 62 786 - -
Pvu2g2510 788 Gene3D - 42 79 - -
Pvu2g2510 788 ProSiteProfiles Zinc finger RanBP2 type profile. 45 74 IPR001876 -
Pvu2g2510 788 CDD HBS1-like_II 587 671 - -
Pvu2g2510 788 Gene3D Translation factors 585 674 - -
Pvu2g2510 788 PANTHER TRANSLATION FACTOR 62 786 - -
Pvu2g2510 788 MobiDBLite consensus disorder prediction 281 309 - -
Pvu2g2510 788 Pfam Elongation factor Tu domain 2 608 670 IPR004161 GO:0005525
Pvu2g2510 788 MobiDBLite consensus disorder prediction 193 226 - -
Pvu2g2510 788 SUPERFAMILY Translation proteins 580 674 IPR009000 -
Pvu2g2510 788 MobiDBLite consensus disorder prediction 234 257 - -
Pvu2g2510 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 602 IPR027417 -
Pvu2g2510 788 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 357 581 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 Gene3D Translation factors 678 787 - -
Pvu2g2510 788 Pfam Elongation factor Tu GTP binding domain 360 575 IPR000795 GO:0003924|GO:0005525
Pvu2g2510 788 MobiDBLite consensus disorder prediction 185 268 - -
Pvu2g2510 788 Gene3D - 348 582 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2510 Pvu-Chr2 41075613 41083580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2510 158 786 Eukaryotic Initiation Factors Gene Family AT5G10630 59.618 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2510 K14416 - gmx:100801724 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1711 6 27556161 27559124 Pvu2g2510 2 41075613 41083580 PCT