Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2507 ATGTTTCAGTCCAAGCGTACGCCAGCAAACACTTATAACTACGTCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAGTCCTTCAAGAACACTCTACCAACTGATGAAGCAAGAGATGGCAACAAAGAGGGAGAACAATGTTGTAGTGATTCAAGCATAAGTGAGAATGAAATTTCAGGTGTTCATAAGGAGGAAGAGGCCACGGAAACGAATAAGCAAGATGAGAGGCCAAACAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCAGTGTCTGCTGTTAGAGATGGTGTGGAGTCATATCAACTTGAGATCAGTGTAGGAGGGCTAGTCAGTGCACTTCTAGGTGTAAAGGAGTTTGATACCAGATGGATTGGGTGGGCTGGCGTGAATGTGCCTGATGATGTTGGACGGAGAGCATTGACTAAAGCTTTGGCTGAAATGCGATGTATTCCAGTATTTCTTGATGAGGAGATAGTTAATCAGTACTATAATGGCTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTTGGGCTTCCGCAAGAAGATCGACTTGCTACCACTCGTACTTTCCAATCCCAATTTGATGCATATAAGGAGGCAAACCAAATATTTGCTGATGTAGTACATCAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATGTTTAAAAGAACGCAACGACAAAATGAAAGTTGGTTGGTTTCTCCATACACCCTTTCCTTCCTCAGAAATACATAGGACTCTACCATCCAGATCAGAGCTGTTGAGATCAGTTCTTGCAGCTGACCTAGTGGGATTCCACACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTTGGGCTTGAGGGCACACCTGACGGAGTAGAAGATCGAGGGAAGCTAACTCGAGTGGCTGCGTTTCCTATTGGGATTGACTCTGAGAGATTCATTCAAGCCCTTGAACTCCCAGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCTCAGAAAATATTGGCATTTGAAAAGTTCCTCGAGGAGAATTCCCACTGGCGCAATAAAGTTGTCTTGCTGCAAATTGCTGTACCTACTAGAAAAGATGTTCCTGAATACCAAAAGCTTGCAAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACAGCTGTTCCAATTCACCATCTGGATCGATCACTTGACTTTCATGAATTATGTGCACTCTATGCTGTAACTGACGTCGCACTTGTTACATCTTTGAGAGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCATCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCGTGGAACATCACAGAAGTTGCTGCTTCTATTGGTTATGCGTTGGATATGCCAGCTGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAACATGTGAAGACTCACACATCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGATCCTCCGTTGCTTCCCAACAAAGTGGCAGTTGACTGTTACTCAAAATCCAATAACCGATTAATCATACTGGGTTTCAATGCCACTTTGACTGAACCAGTGGATTCCCTTGGACGGGCTGGTCAAATTAGAGAACTGGAACTTAAATTACACCCAAATCTGAAGGAAACTTTAAAGAAGCTATCCGATGATCCACAGACAACAATAGTACTTCTCAGTGGGAGCAATCGAGCAGTCCTGGACAAAAACTTCAGTGAATTTAATATGTGGTTGGCAGCGGAAAATGGGATGTTTTTGCGACTCACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTATGCATGGATTGGGTTGATAGCGTGAAGCATGTCTTTGAGTATTTTACTGAAAGAACTCCACGGTCTCATTTTGAGCTTAGGGAGACTTCAATAGTATGGAATTACAAGTATGCAGATGTTGAATTTGGAAGGATTCAAGCAAGAGATTTGCTTCAGCATCTGTGGACAGGACCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCAGTTGAGGTGCGCACAGTTGGCGTGTCAAAGGGAGCAGCTATTGATCGTATCCTTGGAGAGATAGTCCATAACAAAGGCATGAAGGCACCAATTGATTATGTCCTATGCATTGGGCACTTTCTAGCCAAGGACGAAGATGTGTATAAATTTTTTGAGCCAGAGCTCCCTTGTGAATCACCTCCAGTGCCAAGAGCTATGCTATGCAAATCCAATTCATACAGACCATCATCTGTGCAAAAATTAACAGCCAACAGAGCCGGGATTAAGACAGCTCATTACAAGAAACAACGTTCGTTGTCAAACATAGAAAAGAGAGAAATTGACCAATCGAGACCAACATATCGTGATAAAATATCACAGCATGAGGGTTCCTCAGTGCTTGATCTAAAAGGTGATAATTACTTCTCTTGTGTTGTTGGACGGAAAAGATCAAGTGCACGTTACCTTCTTAAAACCTCAGATGATGTTGTCAACCTCTTAAGTGACTTGGCAAAACATTCTTCACCAACAACTTAG 2772 0.4246 MFQSKRTPANTYNYVPLTPRSRLERLLRERELRKSFKNTLPTDEARDGNKEGEQCCSDSSISENEISGVHKEEEATETNKQDERPNKQRLLVVANRLPVSAVRDGVESYQLEISVGGLVSALLGVKEFDTRWIGWAGVNVPDDVGRRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKEANQIFADVVHQHYEEGDVVWCHDYHLMFLPKCLKERNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEDRGKLTRVAAFPIGIDSERFIQALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRNKVVLLQIAVPTRKDVPEYQKLASQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVKTHTSQEWAATFVSELNDTIVEAQLRTRQDPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDSLGRAGQIRELELKLHPNLKETLKKLSDDPQTTIVLLSGSNRAVLDKNFSEFNMWLAAENGMFLRLTSSEWMTTMPENLCMDWVDSVKHVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNASLDVVQGGRSVEVRTVGVSKGAAIDRILGEIVHNKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPCESPPVPRAMLCKSNSYRPSSVQKLTANRAGIKTAHYKKQRSLSNIEKREIDQSRPTYRDKISQHEGSSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVVNLLSDLAKHSSPTT* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2507 923 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
Pvu2g2507 923 Gene3D - 614 772 IPR023214 -
Pvu2g2507 923 CDD HAD_TPP 587 806 - -
Pvu2g2507 923 Pfam Trehalose-phosphatase 613 824 IPR003337 GO:0003824|GO:0005992
Pvu2g2507 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 57 915 - -
Pvu2g2507 923 Gene3D - 678 758 - -
Pvu2g2507 923 MobiDBLite consensus disorder prediction 65 87 - -
Pvu2g2507 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 57 915 IPR001830 GO:0003824|GO:0005992
Pvu2g2507 923 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 557 - -
Pvu2g2507 923 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Pvu2g2507 923 MobiDBLite consensus disorder prediction 34 87 - -
Pvu2g2507 923 Gene3D Glycogen Phosphorylase B; 80 335 - -
Pvu2g2507 923 MobiDBLite consensus disorder prediction 34 53 - -
Pvu2g2507 923 SUPERFAMILY HAD-like 586 914 IPR036412 -
Pvu2g2507 923 Gene3D Glycogen Phosphorylase B; 336 539 - -
Pvu2g2507 923 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2507 Pvu-Chr2 41045416 41059439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2507 8 920 Trehalose Biosynthesis Gene Families AT1G78580 72.737 0.0 1374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2507 K16055 - gmx:100816642 1652.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2507 2 41045416 41059439 Pvu2g2507 2 41045416 41059439 ECH