Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2496 ATGGTACCTAGGACACTCTTTGCTTTGGTACTCTTTACTCTGAGTTGTTTCAGATGGCTAGAATATGCAGAATGCAAACTACCTCAAGAGGAGGTTGATGCTCTTAAGGAAATCATTAGCACGCTGGGGGGCACCTCTTGGGAGTTTGATAGTGATTATTGTCCTATTAAAATACTGAGATCAACACCAGTTCCACCTAAAGAATCTGAAAGGAGAATTGAGTGTGATTACTGTGCTGAAAATAACACCTGTCATGTAGTACTGATCGAGTTCAAGTCGGTCAACCTTACTGGCATGCTTCCACCTCAATTGGTTAAGCTTCCTTACCTCAAAAAAGTTGATTTTTCTTTGAACTACCTAAGTGGTACAATTCCAAAGGAATGGGGTTCAACGAGATTAACTTCCATCTCTCTATTTTTTAATCATTTGTCAGGGGAAATTCCTATAGAGTTGGGAAGAATTACCACTCTAACATACCTGAACCTTGAAGGAAACCAATTTTCTGGTGTTGTTCCCCATGAACTTGGAAGTCTAATTCACCTGGAAAATTTGATTTTAACGTCCAATAAATTGTCTGGGAACTTACCGGTGACACTTGCCAAGTTGCAGAATTTGAGAGATTTCAGGATAAGTGATAACAATTTTAATGGAGAAATACCTAGCTTCCTCATACAGAATTGGAAATTACTTCAAAGATTAGAAATGATTGCAACTGGACTGGAGGGACCTATCCCATCAAATATATATCTTTTGAGTAATTTAACTCAATTGAAGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCTAATTTAAGAAGCATGAAAAGAATAGAGACACTGATTTTGAGAAACTGCCATATTACTGGAGAGCTTCCTAGCTACTTGTGGGATAAGCAGTTCTTGATTATGTTGGACGTAAGTTTCAATAAGTTGGTTGGGAAAATACCAGATGCTAAACATGCAGGGCATCTAAGATTTCTCTTCCTAACTCACAACATGCTAAGTGGTAATATTCCCAACTCAGTCTTGATGGATGGAAGCAGCGTTGACCTTTCTTACAACAATTTTACGTGGCAAGGACCAGATCAACATGCTTGTAGAGATGACCTAAATTTAAACATAAACTTGTTTAGGAGCTTCTTCGGGACCAAATTACGGCAGATTCTTCCATGTTTAAACTTCTCCAATTGTCCTGCATATTCACATTGCTTTCATGTTAATTGTGGTGGAAAGAATTTAAATGTGATGGAAAGTGGTGAAAATGTTCTCTATGAAGGAGATGGAGATTTGTTAGGAAGTGATGCTGCTAAATATTTTATTAACTATAAAAATCACTGGGGATTTAGCAGCACTGGGGACTTCATGGATGATGGCAATTACCTAAATGCTCGTTACACCAGGGCTTTGCCATCTTCAAATTTGCCTGAATTATATAAAACGGCTCGTGTTACTCCACTTTCGCTTACTTATTTTCTCTATTGCTTGGAAAATGGGAAATATACTGTAAAACTCCACTTCGCAGAAATACAATTTACAAACGATAAGACGTATGCAAGTCTTGGGAAGCGCTTATTTGATATTTATGTTCAGGAAAAATTAGTTTGGAAGGATTTTAATATTGAAGATGAAATTCATGGTGCTGAAAAACCACTTACGTTCTCATATAATGTCAGTGTAACAGACAATTTTCTGGAGATTCGATTCTATTGGGCTGGAAAGGGGACTACAAGGGTTCCTGTTGGTGGAGTTTATGGTCCCCTCATATCAGCTCTCTCAATTGTTTCTCATTCCAAACCTTGTTCAGAACATAAAAGTGCAAGGCATACGATAATTGTTGGAGTTGGGTTTGGTATTACAGCTCTGTGCTTTGTCTTTATCATTGTTATTGGAATCTTTTGGTGGAAGAACTGCTTCAAAGGAATAATTAGGAGAATAAAAGGTACTGAAAGACAAGATTCTCAAATGGGGACATTTACATTAGAACAAATTAGAGAGGCCACAGAGGATTTCAGTCCAGCTAACAAGATTGGAGAAGGTGGTTTTGGTTCTGTCTACAAGGGTCAATTATCTGATGGTACATTGGTAGCAGTCAAACAACTCTCATCAAAGTCACGGCAAGGAAATCGTGAATTTTTAAACGAGATAGGCCTAATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGGATCAATTGATGTTGGTGTACGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAAAAGATCAACTTAAACTTGATTGGCCAACAAGGCTTAGGATCTGTATTGGCATGGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAAGACTCAAGATTGTTCATCGAGACATTAAAGCTTCTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCTGACTTTGGGTTGGCTAGGCTTGATGAAGAAGAGAAGTCCCATATCACCACCCGAATTGCTGGGACAATAGGGTACATGGCACCGGAATATGCATTATGGGGTCACTTGTCCTACAAGGCTGATGTTTACAGTTATGGGGTTGTGGTCTTGGAAATTGTTAGTGGGAAGTGCAATCAGAATTACATGCCTAGTGATAATTGTGTTTGCCTTTTAGACAAGGCATGTCATCTACAGCGTACTGGAAACTTAATAGAACTGGTGGATGAAAGGTTGGGATCAGAGGTAAATCCAACTGAAGCAATAATTTTGATGAATGTAGCTCTTCTGTGCACTCAGGTATCACCTTCGCATAGGCCTACAATGTCTGAGGTTGTAAACATGCTCAAAGGAAGAGCAAGCATTCCAGATGCTATCCCACAGCCAAATGACTTTAGTGAAGATTTAAGGTTTAAATCCATTAGGGATATCTACCAACAAAGAGAAAATTCAACAGGAGTCCTTACACTTAACTCACCCTAA 2958 0.3847 MVPRTLFALVLFTLSCFRWLEYAECKLPQEEVDALKEIISTLGGTSWEFDSDYCPIKILRSTPVPPKESERRIECDYCAENNTCHVVLIEFKSVNLTGMLPPQLVKLPYLKKVDFSLNYLSGTIPKEWGSTRLTSISLFFNHLSGEIPIELGRITTLTYLNLEGNQFSGVVPHELGSLIHLENLILTSNKLSGNLPVTLAKLQNLRDFRISDNNFNGEIPSFLIQNWKLLQRLEMIATGLEGPIPSNIYLLSNLTQLKISDINGPSQDFPNLRSMKRIETLILRNCHITGELPSYLWDKQFLIMLDVSFNKLVGKIPDAKHAGHLRFLFLTHNMLSGNIPNSVLMDGSSVDLSYNNFTWQGPDQHACRDDLNLNINLFRSFFGTKLRQILPCLNFSNCPAYSHCFHVNCGGKNLNVMESGENVLYEGDGDLLGSDAAKYFINYKNHWGFSSTGDFMDDGNYLNARYTRALPSSNLPELYKTARVTPLSLTYFLYCLENGKYTVKLHFAEIQFTNDKTYASLGKRLFDIYVQEKLVWKDFNIEDEIHGAEKPLTFSYNVSVTDNFLEIRFYWAGKGTTRVPVGGVYGPLISALSIVSHSKPCSEHKSARHTIIVGVGFGITALCFVFIIVIGIFWWKNCFKGIIRRIKGTERQDSQMGTFTLEQIREATEDFSPANKIGEGGFGSVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLHGCCIEGDQLMLVYEYMENNSLAHALFSSKDQLKLDWPTRLRICIGMAKGLAFLHEESRLKIVHRDIKASNVLLDGNLNPKISDFGLARLDEEEKSHITTRIAGTIGYMAPEYALWGHLSYKADVYSYGVVVLEIVSGKCNQNYMPSDNCVCLLDKACHLQRTGNLIELVDERLGSEVNPTEAIILMNVALLCTQVSPSHRPTMSEVVNMLKGRASIPDAIPQPNDFSEDLRFKSIRDIYQQRENSTGVLTLNSP* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2496 985 Gene3D Ribonuclease Inhibitor 263 372 IPR032675 -
Pvu2g2496 985 SMART serkin_6 671 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2496 985 ProSiteProfiles Protein kinase domain profile. 671 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2496 985 SUPERFAMILY L domain-like 73 317 - -
Pvu2g2496 985 Gene3D Ribonuclease Inhibitor 197 262 IPR032675 -
Pvu2g2496 985 Gene3D Ribonuclease Inhibitor 45 196 IPR032675 -
Pvu2g2496 985 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 66 961 - -
Pvu2g2496 985 Gene3D - 402 599 - -
Pvu2g2496 985 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pvu2g2496 985 Pfam Malectin domain 404 592 IPR021720 -
Pvu2g2496 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Pvu2g2496 985 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 66 961 - -
Pvu2g2496 985 Gene3D Phosphorylase Kinase; domain 1 640 746 - -
Pvu2g2496 985 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Pvu2g2496 985 Gene3D Transferase(Phosphotransferase) domain 1 747 950 - -
Pvu2g2496 985 Pfam Protein tyrosine and serine/threonine kinase 675 941 IPR001245 GO:0004672|GO:0006468
Pvu2g2496 985 CDD STKc_IRAK 677 943 - -
Pvu2g2496 985 SUPERFAMILY Protein kinase-like (PK-like) 654 961 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2496 Pvu-Chr2 40926783 40940156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2496 6 836 Receptor kinase-like Gene Family AT1G29750 57.743 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g2496 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2496 - - vra:106779815 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2496 2 40926783 40940156 Pvu6g1769 6 28146011 28155813 PCT