Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2493 ATGGACGAGATTTCAACAACAAACCATGAGGTGGTCTTAGATGTAAACAAGGATGTCTCTAAAACAACTGAAGGCTCACTTTCCTGTGTCAATGTTTTTTTCTGGCAAAAGTTGGTAGCTGAGGTGGTGGGCACGTATTTCTTGATATTCGCAGGGTGTGCTTCAGTGGTTGTGAACAAGAGCAAAGAAAACGTGGTAACACTTCCTGGGATATCAATTGTTTGGGGACTAGTTGTGACGGTGCTGGTTTACTCTGTTGGTCATATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAAGAGGTTTCCGTGGAAGCAGGTACCAGTTTATGTACTAGCACAGGTTGTTGGATCCATACTTGCAAGTGGGACTCTGAGACTAATATTCACTGGCAATGAGAACCAGTTTCCAGGAACACTTCCATCTGGCACTCACGCCCAAGCTTTCGTGGTTGAATTCATAATCACATTTTTCCTTATGTTTGTCATATCTGGGGTCGCCACTGATAACAGAGCGATCGGTGAGTTGGCAGGGATTGCCATTGGGGCCACGGTGCTGTTGAATGTGATGTTGGCAGGACCAATCACAGGAGCATCAATGAACCCAGCAAGAAGTTTAGGCCCTGCGTTGGTGCACAATGAATTCAGAGGAATATGGATATATTTAGTGTCTCCAACGTTTGGGGCTTTTGTTGGTGCATGGGTGTATAACAGTATTCGTTACACAGATAAGCCACTGCGTGAGATCACCCAAAGTGCCTCTTTCCTTAAAGGAAAAAGGCTTACTGATTCCTCTACCTGA 819 0.4542 MDEISTTNHEVVLDVNKDVSKTTEGSLSCVNVFFWQKLVAEVVGTYFLIFAGCASVVVNKSKENVVTLPGISIVWGLVVTVLVYSVGHISGAHFNPAVTIAFASTKRFPWKQVPVYVLAQVVGSILASGTLRLIFTGNENQFPGTLPSGTHAQAFVVEFIITFFLMFVISGVATDNRAIGELAGIAIGATVLLNVMLAGPITGASMNPARSLGPALVHNEFRGIWIYLVSPTFGAFVGAWVYNSIRYTDKPLREITQSASFLKGKRLTDSST* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2493 272 PANTHER AQUAPORIN NIP2-1 4 265 IPR034294 -
Pvu2g2493 272 SUPERFAMILY Aquaporin-like 31 256 IPR023271 -
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 CDD MIP 36 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 TIGRFAM MIP: MIP family channel proteins 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Pvu2g2493 272 Pfam Major intrinsic protein 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2493 272 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 4 265 - -
Pvu2g2493 272 Gene3D Glycerol uptake facilitator protein. 2 258 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2493 Pvu-Chr2 40911395 40913221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2493 8 272 Major Intrinsic Protein MIP AT5G37820 55.351 6.39e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2493 K09874 - gmx:100798526 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2493 2 40911395 40913221 Pvu2g2493 2 40911395 40913221 ECH
Pvu2g2493 2 40911395 40913221 Pvu6g1773 6 28175987 28178194 PCT