Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2492 ATGGCTGGTTATTCAGGAGGATCTGAAACACACGAGGTGGTTGTAAATGTAACCAAGGACACCCCCAAAACAATGGAACGCTCGAACTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGTTGATAGCTGAGGTGGTGGGCACGTATTTCTTGATATTTGCCGGATGTGGTTCAGTTGTGGTGAACAAGAATAACTACAACGTGGTAACACTTCCTGGGATAGCAATTGTTTGGGGGCTGGTTGTCGCAGTGCTGGTTTACTCTGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAAAAGGTTTCCCTTGTCGCAGGTACCAGCTTATGTGGCAGCTCAGCTGCTAGGAAGCACACTTGCAAGTGGAACTCTGAAGCTATTGTTTATGGGGAAGCATGACCAGTTTTCAGGAACAGTTCCAAGTGGAACTAACCTGCAAGCTTTTCTCTTTGAATTCATAATCACATTCCTCCTTATGTTTGTCATATCAGGGGTTGCCACTGATAACAGAGCGATTGGTGAAATGGCTGGGATTGCAATTGGGTCTACGATACTGCTGAACGTGATGATTGGAGGGCCAGTGACAGGAGCATCAATGAACCCAGTGAGAAGCCTTGGACCTGCTTTTGTGCACTCGGAATACACAGGAATATGGATATACATTTTGGCACCAATTCTTGGAGCTGTGGTTGGAGCATGGGTCTACAATATCATTCGGAACACAGAGACCACACTCTGTGACATCACCAAGAGTGCCTCTTTTCTCAAAGGACGTATTGGTGGCACCAAATAA 819 0.464 MAGYSGGSETHEVVVNVTKDTPKTMERSNSFVSVPFLQKLIAEVVGTYFLIFAGCGSVVVNKNNYNVVTLPGIAIVWGLVVAVLVYSVGHISGAHFNPAVTIAFASTKRFPLSQVPAYVAAQLLGSTLASGTLKLLFMGKHDQFSGTVPSGTNLQAFLFEFIITFLLMFVISGVATDNRAIGEMAGIAIGSTILLNVMIGGPVTGASMNPVRSLGPAFVHSEYTGIWIYILAPILGAVVGAWVYNIIRNTETTLCDITKSASFLKGRIGGTK* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 PANTHER AQUAPORIN NIP2-1 1 268 IPR034294 -
Pvu2g2492 272 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Pvu2g2492 272 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g2492 272 Gene3D Glycerol uptake facilitator protein. 6 259 IPR023271 -
Pvu2g2492 272 SUPERFAMILY Aquaporin-like 31 253 IPR023271 -
Pvu2g2492 272 PANTHER NODULIN-26 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2492 Pvu-Chr2 40901599 40903924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2492 38 265 Major Intrinsic Protein MIP AT5G37810 59.211 5.28e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2492 K09874 - gmx:100813448 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2492 2 40901599 40903924 Pvu6g1774 6 28183127 28186003 PCT