Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2489 ATGAAGTGGGGTGGAAAAAAACCTTCTCCTTCTCCTTCTTCCTCTTCCTCTTCTAGGCCTTCTTTCATATCTCATGTGTCTCCTTTTTCGTGGCTTTCCAAGTTCAAGCATATGAGAATAAACTCAGAGCCAAAACCTGGCGCACTGAAGCAAAATGCAAAGCAGAATTCAACTCCATCAGAGAGCTCACCCTATTATGCTTGTGGGAATAATAGAGGCAGGTTTTATGGTGGGGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGGGCAACGAGCATAGAAAAAGTGATGATATTCTGAAGCCACTAAAGTACCAAATGGATGCTGAACATGTCATTTCATCCTCAAGTTTCCCCGGTGGATTGAATAATGCTAAAAGACAAGGTAGAAGAGAAGCCACTCAGAAGTCGAAGCAGAAGGACACTGGACTGAGAGAAGAAACAACATTGCTGAATGAAGCAGCAAGGAGTGTAAAGGAACTTGAATCCTTGAGGAGGAGATATGAGAGAAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGAAAAGGCAGAAGAGGAAGCCGAGTTTGCATCAAGTCCGTTCTTAGAAAATTATGTGCTGCAATACGAGTCACCAAGAACAATTTGTACACCAAGGAAGCATTTGTTTGCGGATTTCAAGAGTTCTGGCCTTGGAAATCTCAGAGAAGCTCGAGTGTGTAGTCCCCAATTGGATTCTGAGTGGCATAATTTGAAACAAACTGAGGAGTTGAAATTGAAAGCAAAGAGTAACCAACAAATGCAATCGCTTCATGTGAGCAGAGAAAACCAGAGGAGGAAGCCAAAGCACAACTCCAAGGTTAAAGTATATTCTCCAAGGATAGGTTCCAAGGTTGAAGTCCGTAAAATAAAGGCCATAGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGAAGGGTTAGATAGCTTTGCGGTGGTGAAATGTTCTTTGGATCCACAGAAAGATTTCAGAGATTCAATGATTGAGATGATCACGGAGAAACAGATCAGCCAGCCAGAAGAAATGCAAGATCTGCTAGCATGTTATCTGACTTTGAATTCCAATGAGTACCATGATCTAATCATCCAAGTGTTCAAGCAAGTATGGTTGTGCATGAGCCAAGCGAGTTCGGATATTTAA 1200 0.4183 MKWGGKKPSPSPSSSSSSRPSFISHVSPFSWLSKFKHMRINSEPKPGALKQNAKQNSTPSESSPYYACGNNRGRFYGGDDEAFWRLSFGEEGNEHRKSDDILKPLKYQMDAEHVISSSSFPGGLNNAKRQGRREATQKSKQKDTGLREETTLLNEAARSVKELESLRRRYERKAQRVLQEQLLKLEKAEEEAEFASSPFLENYVLQYESPRTICTPRKHLFADFKSSGLGNLREARVCSPQLDSEWHNLKQTEELKLKAKSNQQMQSLHVSRENQRRKPKHNSKVKVYSPRIGSKVEVRKIKAIEEKKKAKLKMKKEEEIVEETEGLDSFAVVKCSLDPQKDFRDSMIEMITEKQISQPEEMQDLLACYLTLNSNEYHDLIIQVFKQVWLCMSQASSDI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2489 399 Coils Coil 146 191 - -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 116 149 - -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 131 149 - -
Pvu2g2489 399 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 395 IPR038933 GO:0045892
Pvu2g2489 399 Pfam Transcriptional repressor, ovate 336 392 IPR006458 -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 258 286 - -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 8 22 - -
Pvu2g2489 399 ProSiteProfiles OVATE domain profile. 332 391 IPR006458 -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 48 67 - -
Pvu2g2489 399 PANTHER TRANSCRIPTION REPRESSOR OFP4 8 395 - -
Pvu2g2489 399 Coils Coil 300 327 - -
Pvu2g2489 399 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 331 392 IPR006458 -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 1 22 - -
Pvu2g2489 399 MobiDBLite consensus disorder prediction 42 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2489 Pvu-Chr2 40871083 40872569 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu2g2489 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2489 - - gmx:106798868 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2489 2 40871083 40872569 Pvu2g2489 2 40871083 40872569 ECH
Pvu2g2489 2 40871083 40872569 Pvu6g1782 6 28249292 28250509 PCT