Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2479 ATGGATACTAAACTCACCAACAACAACCGTCAAGACTCTGATCCACCGCAAGAAAACATTGCCGACTCCCCTCCTTCTTCCTCTCTCTTCAACATCGATGCCGTTGTCACCTCCCCCACTTCCTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACGCCACCATCGGATTCGTGGGCATGGAGAAAGTACGGGCAGAAACCCATCAAGGGTTCACCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGCCCGGCACGGAAACAAGTAGAAAGGAGCTGCGTGGACCCCACAATGTTGGTCGTCACTTATTCCTCCGACCACAACCATCCCTGGCCAGCTTCTAGAAACAACACCAGGCCCACAAAGAAGCCCGAGCCCGAACCAGTAACGGACCCGGTCGAACCGGAGCCAGAACCGGAGGAGAAGTTTGCGGAACTGGGCGGGGACGAATCCATGATCACCACCGCGGATGAGATGGGGTGGCTGGGGGAGATGGAGACAACGACGTCCACCGTTCTCGAAAGCCCAATTATGTCCGCAGCGTACCATGCTGACGTGGAGTCGGCGTTGCTGCCGATGAGGGAAGAGGACGAGCTGCTCTTCGCCGACCTCGGGGAGCTTCCGGAGTGCTCCGTCATGTTCCGGCAGGGGCTGCTGGAGGAGAGGCGGCGGTACACGGCGCCGTGGTGCGGGACCACAAGTTGA 774 0.5711 MDTKLTNNNRQDSDPPQENIADSPPSSSLFNIDAVVTSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPASRNNTRPTKKPEPEPVTDPVEPEPEPEEKFAELGGDESMITTADEMGWLGEMETTTSTVLESPIMSAAYHADVESALLPMREEDELLFADLGELPECSVMFRQGLLEERRRYTAPWCGTTS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2479 257 MobiDBLite consensus disorder prediction 64 85 - -
Pvu2g2479 257 MobiDBLite consensus disorder prediction 128 166 - -
Pvu2g2479 257 MobiDBLite consensus disorder prediction 143 166 - -
Pvu2g2479 257 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 241 IPR044810 GO:0003700
Pvu2g2479 257 Pfam WRKY DNA -binding domain 76 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2479 257 MobiDBLite consensus disorder prediction 128 142 - -
Pvu2g2479 257 MobiDBLite consensus disorder prediction 1 50 - -
Pvu2g2479 257 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 6 241 - -
Pvu2g2479 257 SMART WRKY_cls 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2479 257 Gene3D WRKY domain 63 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2479 257 ProSiteProfiles WRKY domain profile. 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2479 257 SUPERFAMILY WRKY DNA-binding domain 72 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2479 257 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2479 Pvu-Chr2 40784105 40786025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2479 11 239 WRKY Transcription Factor Family AT1G29280 56.303 8.89e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2479 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2479 - - gmx:100127392 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2479 2 40784105 40786025 Pvu2g2479 2 40784105 40786025 ECH