Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2464 ATGAAGCCCTTTTGCAGATTCTTGATTCTCTTATCGCTATTTTCTCTGGTGGAATCTTCATGCAACAGTGATGAAGAGCACGTCTTGGTGTCGAAGGCTTTCAAATCAGTCTCTGGCTTCAACGCTTACTCCTGGTTCCAAACCAACTGTTCACAAGCTCAAATCACCAGAATAGTACTTCCATCCCAAAACCTCACTGGCACAATCTCCTGGGGTTACCTGAGGAACATGTCCAACCTACAGGTTCTCGATCTCTCAGGAAATTCCTTACAAGGCCACGTGCCAAGCTGGTTTTGGTCAACTTCATCCTTGTTGGAAATAAACCTCTCCAGAAACAGGTTCGGAGGGAGCATCATTGTTCACTCCTCCAAACCCACACCACAAAATACCTCGTTTTCGTTTTCATCCATTCAAACGCTCAATCTCTCCCACAACAGGTTCACCAATTCAATCCAACTTTCTGCCTTCCAGAACCTTAAAATCCTCGACCTTTCCAATAACAACCTGCGAACACTCCCCTCCGGACTCCAAAACCTCTTCAAGCTTGTACACCTCGATCTCTCAAACTGTAATCTCCAAACCAACGTAAAACCAGTTTCCTCTCTTCACTCTTTTCGCTACTTGGACTTATCAAACAACACCTTCGCGGGAAATTTCCCTTTGGATTTCCCTCCACTCTCCACCCTCGAGTTCCTGAACATCTCCTATAACAACTTCACCTCATCAACTAGCCTAACCAAATTCAACAGTTTCGGTAAATCAGCTTTTGTCCACGCTGGCAACAATTTCACCTACGACAACACCGCGTCGAAAACGACCAACAGCAGTAAAAACTCAGCGCAAGCCACCCACAAGAAACAAGGGAAGAGAAAATCCAAAGCGCTGATTGCTGCAGCCTCGTCAGCAGGATCAGCCCTTGTCCTAATTCTGTTGTCCATTTGGGTACTCCGCATTATTATTCGGAAGAGGAAGCAACGCGCCAAGAGGAGCAAGTGGGCGATTTCCATGCCGGTTCCACATGGAATGAACGTGGTGACTAGCAGGGTGGAGAAATCAGGGCCGTTCGCGTTCGAGACTGAATCGGGGTCAACGTGGGTGGCTGACCTGAAGGAACCGTCTTCTGCGCCGGTGGTGATGTTCGAGAAGCCGTTGATGAACCTTAGCTTCAAGGACCTCATTGTTGCCACCTCACACTTCGGTAAAGACTCGCTGCTCGCGGAGGGAAGGTGTGGGCCCGTTTACAGAGCCGTGCTGCCGGGGGACCTCCACGTGGCAATCAAGGTCCTGGAACACGCTAGAGACGTTGATCCTGATGACTCAGTCGCCACGTTCGTTGACCTCTCAAGACTCAAGCACCCCAACCTGTTGCCCCTCTCCGGTTACTGCATTGCTGGTAAGGAGAAACTGGTACTGTACGAGTACATGGCGAACGGCGACCTAGGAAGATGGCTACACGAGCTTCCAACTGGGGATACCAACGTGGAGGACTGGACAAGCGACACGTGGGAGATTCAAAACGGCGTCGTGGACGATGGATCCCCAGAAAAGATGGGGTGGCTGACACGACACCGTATCGCGGTTGGTATAGCGCGTGGTCTCGCTTACCTGCACCACGCGCGTTCGAAGCCCGTGGTGCACGGCCACTTCGTCACCTCCAACATTCTACTCGCCGACGATTTCGAGCCCCGGATCTCCGATTTCGGGTTGCGACCCGACCCGAACCCGAACGGCGGCATTGAGGCCGACGTGTACTGCTTCGGGGCAGCGCTGATGGAGCTCCTAACTGGGAAGGAAAGCACGGCGGAGACGGTGGCAGCGGCGAGGAAGGCGGTGAGGGAGGGGAACGGCGTTAGGGTTGTGGACGAGAGGCTCCTAGTCGGTGGTGACTCGGTAGTGAGTGAGATGGTGGAGAGTCTCCGAGTGGCGTTTTTGTGTACGGCGGAAGATCCTTGGAAGAGGCCAACAATGCAACAGGTTTTGGGTTTGCTGAAAGACATTCGTCCTCATGAACAGCAACTCGTGACGAGTTGA 2031 0.5214 MKPFCRFLILLSLFSLVESSCNSDEEHVLVSKAFKSVSGFNAYSWFQTNCSQAQITRIVLPSQNLTGTISWGYLRNMSNLQVLDLSGNSLQGHVPSWFWSTSSLLEINLSRNRFGGSIIVHSSKPTPQNTSFSFSSIQTLNLSHNRFTNSIQLSAFQNLKILDLSNNNLRTLPSGLQNLFKLVHLDLSNCNLQTNVKPVSSLHSFRYLDLSNNTFAGNFPLDFPPLSTLEFLNISYNNFTSSTSLTKFNSFGKSAFVHAGNNFTYDNTASKTTNSSKNSAQATHKKQGKRKSKALIAAASSAGSALVLILLSIWVLRIIIRKRKQRAKRSKWAISMPVPHGMNVVTSRVEKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLMNLSFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPGDLHVAIKVLEHARDVDPDDSVATFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEYMANGDLGRWLHELPTGDTNVEDWTSDTWEIQNGVVDDGSPEKMGWLTRHRIAVGIARGLAYLHHARSKPVVHGHFVTSNILLADDFEPRISDFGLRPDPNPNGGIEADVYCFGAALMELLTGKESTAETVAAARKAVREGNGVRVVDERLLVGGDSVVSEMVESLRVAFLCTAEDPWKRPTMQQVLGLLKDIRPHEQQLVTS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2464 676 PANTHER KINASE, PUTATIVE-RELATED 3 669 - -
Pvu2g2464 676 Gene3D Transferase(Phosphotransferase) domain 1 577 675 - -
Pvu2g2464 676 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 669 - -
Pvu2g2464 676 Pfam Leucine rich repeat 56 114 IPR001611 GO:0005515
Pvu2g2464 676 Pfam Leucine rich repeat 136 192 IPR001611 GO:0005515
Pvu2g2464 676 SUPERFAMILY L domain-like 43 242 - -
Pvu2g2464 676 Gene3D Ribonuclease Inhibitor 123 298 IPR032675 -
Pvu2g2464 676 ProSiteProfiles Protein kinase domain profile. 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2464 676 Gene3D Phosphorylase Kinase; domain 1 359 474 - -
Pvu2g2464 676 SMART LRR_typ_2 179 203 IPR003591 -
Pvu2g2464 676 SMART LRR_typ_2 156 178 IPR003591 -
Pvu2g2464 676 SMART LRR_typ_2 77 100 IPR003591 -
Pvu2g2464 676 Gene3D Transferase(Phosphotransferase) domain 1 475 576 - -
Pvu2g2464 676 Pfam Protein tyrosine and serine/threonine kinase 403 571 IPR001245 GO:0004672|GO:0006468
Pvu2g2464 676 SUPERFAMILY Protein kinase-like (PK-like) 376 667 IPR011009 -
Pvu2g2464 676 Gene3D Ribonuclease Inhibitor 15 122 IPR032675 -
Pvu2g2464 676 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2464 Pvu-Chr2 40558650 40561863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2464 55 666 Receptor kinase-like Gene Family AT5G07280 30.382 1.39e-69 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pvu2g2464 PK_Tyr_Ser-Thr 6.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2464 - - gmx:100788556 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2464 2 40558650 40561863 Pvu6g1812 6 28507955 28511269 PCT