Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2459 ATGGAAAACATATGGGACCCATATGGATTATGGCTCAAAATTTATGTTGGATTGATTTCTCTATGGGGAACTCAACAGTGTTTGTCTCTAAATGATGAAGGATTATCCTTGTTGGAATTTCGGGGAAGAATAACTTCTGATCCTTTTCATGCTCTGGCAAATTGGAATCCAAATGATTGTAACCCTTGCAAGTGGTTTGGTGTTAGTTGTGTAGATGGTAAAGTGCGAATGCTGATCCTACCTGCACTCTCTTTGGAAGGCACATTGGCTCCTGAGCTTGGGAAACTTAGTCATTTAAAATCCCTTGTATTATACAAGAACAGTTTTTCTGGTACTATTCCCAACGAACTTGGTGATCTAGACAAGCTGGAGTTATTGGATCTAAGGGGGAATAACTTGAATGGATGTGTCCCAACAAAAATTGGCCAGACGTTGTTGTCAGAACAATTGTTAACTTGTGACAAGAAATGTGAAGAGATTGGAAATATCAGATTGCCCTGTAATATCAATCGTTCAACTCCTTTGACAACTGTATCACGTGGCAACAACAGAAAGGTTGCACCCAGAAATTTCAAGCAATTGAATGAGGCAGATTCGTCTTCTATTCCACTTAAAGGAGCGCTAAAAAAAGGCGTCACTGCTGTCATTGCTGTCACACTGCCATTGTTCAAGCTAGGAAAGGCCACCCCTCATGCCCATGCAGAGAAATGGTGTGACATTCAGACTAGCTCTGATGATTCAGAGATTGGCCAGAATGTAGCAAATCTAGTCAATTCAGCACGGCGCAGGCTGCTTGATCAGTCCAGTAACCTTGCAGCTGTACCTTTCAGTGGTGGGCCTACTATACAGATGAGTTCTATTCCAATTACCCAGAGCAGTGGAGCTTTTCCAGCTTTTCCAGACACCAATACGAAGCAAAATCTGTCGCCTGCACAATTACCTTCACCTTCTAATTTTCCATCTATTGATCAATCAAGTCAACAAAATTCAGCTAATGTTGCTTCTGGAAAATTATGGGAGTATATTATTATAATAGCAGGTGTATCTTTCTTGGTCATTATTGTTTTGATCATGCTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAAGCCATGGAAGACAGGAATAAGTGGACAGCTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAACCAGGCAGAGCTGGAGACAGCCTGTGAAGACTTCAGTAATATTATTAATAGTTTTGACGAATGCACCATATATAAGGGAACACTCTCCAGTGGAGTCGAGATTGCTGTTGATTCAACTATTGTTTCTTCAGCCCGTGATTGGTCAAAGAACATGGAGACAGCCTATCGCAAAAAGATTGCTACATTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGGTACTGTGATGAAGAACAACCATTCACCAGAATGATGGTATTTGAGTATGCTCCGAATGGAAGCTTATTTGAGCATCTGCACGTGAAGGAAGTTGAACATCTTGACTGGAGCGCAAGAATGAGAGTAATTATGGGCACGGCATATTGTCTTCAGTATATGCACCATGATCTGAATCCCCCAGTAGCTCATTCCAACCTCAATTCAGTTGCTATATTATTGACTGATGACTTTGCTGCTAAAATATCAGAAATCGCTTTTGGCAAGAGTGTACTTTCACAAGCCAACACACCTGGACATGAGTCACAGAAATCTGACTTGCCACCCCAGGCTGATCCTGAAACCGATGTATATAACTTTGGAGTGTTGTTGCTTGAAATCATTTCCGGAAAACTACCATACTCTGAAGAACATGGCCACCTTGCCAACTGGGCTGTTCAGCACTTGAATGATAAGCAAAGCATCAGCAATCTGATCGATCCCTCGTTGGAGTCCTTCAAAGAAGAAGAACTTGATGTCATTTGTGAGGTGGTCAAAGATTGTCTTCAATCTGATGCAAGGCTAAGACCAACAATGAAGGACTTAGCCCCTAGATTGAGGGAAGTGCTTCATGTATCACCTGAGCAAGCTGTTCCAAGACTCTCTCCTCTCTGGTGGGCTGAACTGGAGATCTTATCATTAGAGACCTCTTAA 2094 0.4179 MENIWDPYGLWLKIYVGLISLWGTQQCLSLNDEGLSLLEFRGRITSDPFHALANWNPNDCNPCKWFGVSCVDGKVRMLILPALSLEGTLAPELGKLSHLKSLVLYKNSFSGTIPNELGDLDKLELLDLRGNNLNGCVPTKIGQTLLSEQLLTCDKKCEEIGNIRLPCNINRSTPLTTVSRGNNRKVAPRNFKQLNEADSSSIPLKGALKKGVTAVIAVTLPLFKLGKATPHAHAEKWCDIQTSSDDSEIGQNVANLVNSARRRLLDQSSNLAAVPFSGGPTIQMSSIPITQSSGAFPAFPDTNTKQNLSPAQLPSPSNFPSIDQSSQQNSANVASGKLWEYIIIIAGVSFLVIIVLIMLCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNQAELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVSSARDWSKNMETAYRKKIATLSRVNHKNFTNLIGYCDEEQPFTRMMVFEYAPNGSLFEHLHVKEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPVAHSNLNSVAILLTDDFAAKISEIAFGKSVLSQANTPGHESQKSDLPPQADPETDVYNFGVLLLEIISGKLPYSEEHGHLANWAVQHLNDKQSISNLIDPSLESFKEEELDVICEVVKDCLQSDARLRPTMKDLAPRLREVLHVSPEQAVPRLSPLWWAELEILSLETS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2459 697 SUPERFAMILY L domain-like 31 144 - -
Pvu2g2459 697 Pfam Protein tyrosine and serine/threonine kinase 416 665 IPR001245 GO:0004672|GO:0006468
Pvu2g2459 697 MobiDBLite consensus disorder prediction 306 326 - -
Pvu2g2459 697 Gene3D Ribonuclease Inhibitor 34 152 IPR032675 -
Pvu2g2459 697 SUPERFAMILY Protein kinase-like (PK-like) 391 665 IPR011009 -
Pvu2g2459 697 ProSiteProfiles Protein kinase domain profile. 367 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2459 697 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pvu2g2459 697 Gene3D Transferase(Phosphotransferase) domain 1 485 678 - -
Pvu2g2459 697 PANTHER PROTEIN MALE DISCOVERER 2 1 696 - -
Pvu2g2459 697 Gene3D Phosphorylase Kinase; domain 1 373 484 - -
Pvu2g2459 697 PANTHER LRR RECEPTOR-LIKE KINASE 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2459 Pvu-Chr2 40501069 40507895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2459 70 681 Receptor kinase-like Gene Family AT1G75820 25.776 3.30e-43 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu2g2459 PK_Tyr_Ser-Thr 6.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2459 - - gmx:100808098 1123.23