Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2446 ATGGCTTCTCCCGGCGGAGCCTGTTCATCCGGATCCAGTTCTCTTCAAAACTCAGGGTCCGAGGGAGACCGAGGCATGGTGGATCAGAGGAAGAGGAAGAGAATGCAGTCGAACAGGGAATCGGCACGCAGATCGAGGATGAGGAAACAGCAGCACCTGGAAGGTTTGAGTGGCCAATTGGATGAGCTGAAAAAGGAGAACAACGAGATGAACAGGAACATAGGCATGACGACGCAGGTGTACCTGAAAGTGGAAGCAGAGAACGCGATTCTGAGGGCGCAGATGGCTGAACTCAGCAACAGATTGAACTCTCTGAACGAAATCATCAGTTTCATAAACTCCACGAACTACTTGGTGTGGGATGAGGCACAGGAGACTCAGATGTTCAATGATTGTGGCTTCATGGATGCTTGGAATGGAATGCCCCTCAATCAACCAATCATGGCTTCCGCTGACAATGACATCTTGATGATGTATTGA 480 0.4979 MASPGGACSSGSSSLQNSGSEGDRGMVDQRKRKRMQSNRESARRSRMRKQQHLEGLSGQLDELKKENNEMNRNIGMTTQVYLKVEAENAILRAQMAELSNRLNSLNEIISFINSTNYLVWDEAQETQMFNDCGFMDAWNGMPLNQPIMASADNDILMMY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2446 159 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pvu2g2446 159 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Pvu2g2446 159 MobiDBLite consensus disorder prediction 1 23 - -
Pvu2g2446 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 74 IPR004827 GO:0003700|GO:0006355
Pvu2g2446 159 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 157 - -
Pvu2g2446 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
Pvu2g2446 159 MobiDBLite consensus disorder prediction 24 51 - -
Pvu2g2446 159 Gene3D - 28 84 - -
Pvu2g2446 159 Coils Coil 46 108 - -
Pvu2g2446 159 CDD bZIP_plant_GBF1 31 79 IPR045314 GO:0003700|GO:0006355
Pvu2g2446 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pvu2g2446 159 MobiDBLite consensus disorder prediction 1 66 - -
Pvu2g2446 159 Pfam bZIP transcription factor 30 76 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2446 Pvu-Chr2 40336995 40338182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2446 23 152 bZIP Transcription Factor Family AT4G34590 47.552 2.67e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu2g2446 bZIP_1 2.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2446 K25786 - gmx:778139 228.794